Pre_GI: BLASTP Hits

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Query: NC_006347:3248043:3254110 Bacteroides fragilis YCH46, complete genome

Start: 3254110, End: 3255873, Length: 1764

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016001:3293000:3297173329717332989361764Flavobacterium branchiophilum, complete genomeVgr family protein3e-107389
NC_016001:3293000:3318138331813833199011764Flavobacterium branchiophilum, complete genomeVgr family protein3e-107389
NC_016001:3267772:3288343328834332900371695Flavobacterium branchiophilum, complete genome1e-104380
NC_016001:3267772:3274058327405832759471890Flavobacterium branchiophilum, complete genomeVgr family protein7e-88325
NC_015164:1208874:1223342122334212251531812Bacteroides salanitronis DSM 18170 chromosome, complete genomeRhs element Vgr protein3e-73276
NC_016510:871000:8803498803498822711923Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein3e-50200
NC_015638:2511249:2523131252313125248971767Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRhs element Vgr protein1e-48194
NC_016510:2175000:2183187218318721852922106Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein1e-46187
NC_016510:2991687:3002493300249330044121920Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein3e-41170
NC_016510:1828978:1838566183856618404851920Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein3e-41170
NC_014934:4259670:4278907427890742806881782Cellulophaga algicola DSM 14237 chromosome, complete genomerhs element vgr protein2e-40167
NC_014934:4259670:4261249426124942630601812Cellulophaga algicola DSM 14237 chromosome, complete genomerhs element vgr protein2e-34147
NC_016510:1828978:184344918434491843970522Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein5e-2099.8
NC_014958:3207431:3219009321900932207151707Deinococcus maricopensis DSM 21211 chromosome, complete genomeRhs element Vgr protein8e-1892.4
NC_009925:5957806:5976739597673959786971959Acaryochloris marina MBIC11017, complete genomeRhs element Vgr protein1e-1585.1
NC_016510:871000:885237885237885884648Flavobacterium columnare ATCC 49512 chromosome, complete genomeRhs element Vgr protein1e-1585.1
NC_014355:1865003:1901360190136019036122253Candidatus Nitrospira defluvii, complete genomehypothetical protein6e-1583.2
NC_013855:196778:2028972028972049902094Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein8e-1582.4
NC_009783:1956000:1964312196431219666272316Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-1171.6
NC_020829:809457:8210318210318230702040Pseudomonas denitrificans ATCC 13867, complete genomeRhs element Vgr protein5e-1170.1
NC_010625:670482:6766396766396787832145Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion system Vgr family protein1e-1068.6
NC_010995:4403463:4404148440414844059411794Cellvibrio japonicus Ueda107, complete genomeRhs element Vgr protein3e-1067.4
NC_010501:3013103:3033437303343730359922556Pseudomonas putida W619, complete genometype VI secretion system Vgr family protein4e-1067
NC_010645:278906:2815172815172833671851Bordetella avium 197N, complete genomehypothetical protein4e-1067
NC_015136:813701:8178108178108202572448Burkholderia sp. CCGE1001 chromosome 1, complete sequencetype VI secretion system Vgr family protein5e-1066.6
NC_011898:1829581:183062418306241831343720Clostridium cellulolyticum H10, complete genomeRhs element Vgr protein7e-1066.2
NC_007005:4857768:4863154486315448657152562Pseudomonas syringae pv. syringae B728a, complete genomeRhs element Vgr protein7e-1066.2
NC_011989:2795811:2810028281002828121152088Agrobacterium vitis S4 chromosome 1, complete sequencevgrG protein8e-1065.9
NC_016599:1412000:1428712142871214304931782Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeRhs element Vgr protein1e-0965.5
NC_015740:110633:1219421219421239662025Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeRhs element Vgr protein5e-0963.2
NC_012912:777592:7775927775927793821791Dickeya zeae Ech1591, complete genomeRhs element Vgr protein1e-0862.4
NC_012724:2547500:2565465256546525676242160Burkholderia glumae BGR1 chromosome 1, complete genomeRhs element Vgr protein1e-0862
NC_010170:1661915:1667581166758116694641884Bordetella petrii, complete genomehypothetical protein2e-0861.2
NC_014311:1:2121921219239872769Ralstonia solanacearum PSI07 chromosome, complete genomeVgrG protein ; type VI secretion system component3e-0860.8
NC_011149:1110642:1114691111469111168322142Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion system Vgr family protein3e-0860.8
NC_010322:3084834:3094169309416930960101842Pseudomonas putida GB-1 chromosome, complete genomeImpA family type VI secretion-associated protein3e-0860.8
NC_003295:3688000:3701304370130437040692766Ralstonia solanacearum GMI1000, complete genomePUTATIVE VGR-RELATED PROTEIN3e-0860.5
NC_012779:2619871:2641737264173726437221986Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-0860.1
NC_011205:1227373:1227373122737312294872115Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Vgr family type VI secretion system8e-0859.3
NC_013961:3083816:3102718310271831046521935Erwinia amylovora, complete genomeputative type VI secretion system, effector protein vgrG8e-0859.3
NC_013971:666730:6667306667306686641935Erwinia amylovora ATCC 49946 chromosome, complete genomeRhs family protein8e-0859.3
NC_016816:1852659:1857334185733418600452712Pantoea ananatis LMG 5342, complete genomeImpA family type VI secretion-associated protein8e-0859.3
NC_009439:918534:9319259319259340092085Pseudomonas mendocina ymp, complete genomeRhs element Vgr protein1e-0758.9
NC_018868:973379:9906359906359925211887Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-0758.9
NC_016831:1865681:1887460188746018895712112Salmonella enterica subsp. enterica serovar Gallinarum/pullorumRHS-family protein1e-0758.9
NC_015138:322386:3344743344743372302757Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype VI secretion system Vgr family protein1e-0758.5
NC_011274:1129686:1135593113559311377042112Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91RHS family protein2e-0758.2
NC_009778:3832000:3852781385278138547211941Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0758.2
NC_020260:3836500:3860812386081238627431932Cronobacter sakazakii Sp291, complete genometype VI secretion system Vgr family protein2e-0758.2
NC_014837:2709813:2727626272762627295481923Pantoea sp. At-9b chromosome, complete genometype VI secretion system Vgr family protein2e-0758.2
NC_017267:1348005:1351214135121413539732760Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeRhs element Vgr protein2e-0757.8
NC_009832:3313058:3318424331842433203611938Serratia proteamaculans 568, complete genomeRhs element Vgr protein2e-0757.8
NC_010717:1551000:1586899158689915896612763Xanthomonas oryzae pv. oryzae PXO99A, complete genomeRhs element Vgr protein2e-0757.8
NC_017267:1348005:1363386136338613653831998Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeRhs element Vgr protein3e-0757.4
NC_007511:1780500:1794239179423917965122274Burkholderia sp. 383 chromosome 2, complete sequenceRhs element Vgr protein3e-0757.4
NC_012997:1689583:1690279169027916922731995Teredinibacter turnerae T7901, complete genometype VI secretion system Vgr family protein3e-0757.4
NC_007492:2310793:2328822232882223308642043Pseudomonas fluorescens PfO-1, complete genomeRhs element Vgr protein4e-0757
NC_016582:10638524:1063852410638524106404641941Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRhs element Vgr protein5e-0756.6
NC_009439:4913767:4920544492054449226522109Pseudomonas mendocina ymp, complete genomeRhs element Vgr protein5e-0756.6
NC_010501:2796000:2798673279867328005231851Pseudomonas putida W619, complete genometype VI secretion system Vgr family protein5e-0756.6
NC_014323:992978:1028934102893410317202787Herbaspirillum seropedicae SmR1 chromosome, complete genomeVGR-related protein5e-0756.6
NC_007492:2994036:3010181301018130122352055Pseudomonas fluorescens PfO-1, complete genomeRhs element Vgr protein6e-0756.2
NC_009792:4017510:4032254403225440342542001Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0756.2
NC_020064:2921809:2947838294783829504232586Serratia marcescens FGI94, complete genomeRhs element Vgr protein1e-0655.8
NC_020829:1307736:1323932132393213260102079Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein8e-0755.8
NC_012214:745302:7470987470987490261929Erwinia pyrifoliae Ep1/96, complete genomeRhs element Vgr protein1e-0655.5
NC_010162:6562571:6592320659232065945302211Sorangium cellulosum 'So ce 56', complete genomeRhs element Vgr protein2e-0655.1
NC_014623:1883259:1886656188665618884521797Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRhs element Vgr protein2e-0655.1
NC_010468:2406387:2419976241997624220842109Escherichia coli ATCC 8739, complete genometype VI secretion system Vgr family protein2e-0654.7
NC_002947:3492379:3508370350837035102261857Pseudomonas putida KT2440, complete genomehypothetical protein2e-0654.7
NC_008027:4280000:4296403429640342984452043Pseudomonas entomophila L48, complete genomehypothetical protein2e-0654.7
NC_007384:1763375:1780702178070217828102109Shigella sonnei Ss046, complete genomeunknown protein associated with Rhs element3e-0654.3
NC_016822:1839739:1859469185946918615772109Shigella sonnei 53G, complete genomeRhs element protein3e-0654.3
NC_003296:1419992:1437516143751614397982283Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VGR-RELATED PROTEIN2e-0654.3
NC_014310:1413210:1436076143607614383582283Ralstonia solanacearum PSI07 megaplasmid, complete sequencevgr-related protein2e-0654.3
NC_011741:256932:2606412606412627822142Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-0653.5
CU928160:256932:2606412606412627822142Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein, putative VgrG protein, Encoded within repeats that are hotspots for chromosomal duplication formation; Function of pro5e-0653.5
NC_007384:278810:2788102788102809512142Shigella sonnei Ss046, complete genomeunknown protein associated with Rhs element5e-0653.5
NC_002695:261235:2648612648612670022142Escherichia coli O157:H7 str. Sakai, complete genomeVgrG6e-0653.1
NC_013941:261094:2648042648042669452142Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeVgrG6e-0653.1
NC_002655:261236:2648622648622670032142Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-0653.1
NC_011353:261220:2648462648462669872142Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeImpA family type VI secretion-associated protein6e-0653.1
NC_013008:261226:2648522648522669932142Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-0653.1
NC_015761:2982000:2983139298313929852682130Salmonella bongori NCTC 12419, complete genomevgrS protein8e-0652.8