Query: NC_006177:3192500 Symbiobacterium thermophilum IAM 14863, complete genome
Start: 3192500, End: 3211479, Length: 18980
Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria
General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015563:606783 | 606783 | 626713 | 19931 | Delftia sp. Cs1-4 chromosome, complete genome | 7e-28 | 133 | BLASTN svg | BLASTP svg |
NC_010002:661696 | 661696 | 688893 | 27198 | Delftia acidovorans SPH-1, complete genome | 7e-28 | 133 | BLASTN svg | BLASTP svg |
NC_012559:731859 | 731859 | 756303 | 24445 | Laribacter hongkongensis HLHK9, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_015422:4395388* | 4395388 | 4419390 | 24003 | Alicycliphilus denitrificans K601 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_014910:4026613* | 4026613 | 4051121 | 24509 | Alicycliphilus denitrificans BC chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_015138:4905935 | 4905935 | 4930926 | 24992 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_002947:4931476 | 4931476 | 4957516 | 26041 | Pseudomonas putida KT2440, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009512:1691930* | 1691930 | 1718076 | 26147 | Pseudomonas putida F1, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_013851:3300278 | 3300278 | 3321290 | 21013 | Allochromatium vinosum DSM 180 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_010501:4080937* | 4080937 | 4106727 | 25791 | Pseudomonas putida W619, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_004129:1848701 | 1848701 | 1875454 | 26754 | Pseudomonas fluorescens Pf-5, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_010512:866932 | 866932 | 892099 | 25168 | Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009439:20545 | 20545 | 44427 | 23883 | Pseudomonas mendocina ymp, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010515:1618093* | 1618093 | 1655159 | 37067 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012808:594000* | 594000 | 619602 | 25603 | Methylobacterium extorquens AM1, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012791:2386000 | 2386000 | 2408977 | 22978 | Variovorax paradoxus S110 chromosome 1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020126:8080574 | 8080574 | 8105228 | 24655 | Myxococcus stipitatus DSM 14675, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011757:748223* | 748223 | 795422 | 47200 | Methylobacterium chloromethanicum CM4, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_003919:457482* | 457482 | 480391 | 22910 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_010125:1651687* | 1651687 | 1676892 | 25206 | Gluconacetobacter diazotrophicus PAl 5, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_003902:1416000 | 1416000 | 1438211 | 22212 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007492:1735595 | 1735595 | 1757535 | 21941 | Pseudomonas fluorescens PfO-1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018870:303217 | 303217 | 324526 | 21310 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010424:1857062 | 1857062 | 1880720 | 23659 | Candidatus Desulforudis audaxviator MP104C, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009454:2201987 | 2201987 | 2224579 | 22593 | Pelotomaculum thermopropionicum SI, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |