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Query: NC_006177:46745:66431 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 66431, End: 66712, Length: 282

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006177:280234:309212309212309967756Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit3e-47186
NC_006177:2883476:289587528958752896630756Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit3e-47186
NC_006177:1422932:143587014358701436652783Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit2e-34144
NC_008740:3520500:352076635207663521521756Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein6e-24109
NC_008740:443274:468125468125468880756Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein6e-24109
NC_008740:1815743:182831318283131829068756Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein2e-23107
NC_008740:220642:232414232414233169756Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein2e-23107
NC_014394:738365:749228749228749962735Gallionella capsiferriformans ES-2 chromosome, complete genomeIstB domain-containing protein ATP-binding protein5e-1992.8
NC_008536:9538891:955614295561429556882741Solibacter usitatus Ellin6076, complete genomeIstB domain protein ATP-binding protein8e-1992.4
NC_008740:2989856:299209629920962992851756Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein1e-1891.7
NC_008740:3520500:353306235330623533793732Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein4e-1890.1
NC_008740:4109000:411112041111204111851732Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein4e-1890.1
NC_008750:1253354:126284012628401263595756Shewanella sp. W3-18-1, complete genomeIstB domain protein ATP-binding protein7e-1889.4
NC_007645:5747721:575105357510535751808756Hahella chejuensis KCTC 2396, complete genomeIstB helper protein, IS21 family2e-1787.8
NC_007645:6461267:647360664736066474361756Hahella chejuensis KCTC 2396, complete genomeIstB helper protein, IS21 family2e-1787.8
NC_007645:6350079:636642663664266367181756Hahella chejuensis KCTC 2396, complete genomeIstB helper protein, IS21 family2e-1787.4
NC_015740:4072415:407963340796334080388756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_015740:2407500:243771624377162438471756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_015740:3631326:365380136538013654556756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_015740:3631326:363425936342593635014756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_015740:2614317:263481926348192635574756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_015740:141910:155829155829156584756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeISPsy14, transposition helper protein1e-1685.5
NC_009434:608765:651407651407652162756Pseudomonas stutzeri A1501, complete genomeISPsy14, transposition helper protein9e-1785.5
NC_008738:1:178541785418609756Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequenceIstB domain protein ATP-binding protein1e-1684.7
NC_009434:3611738:368478236847823685537756Pseudomonas stutzeri A1501, complete genomeISPsy14, transposition helper protein2e-1684.7
NC_015572:1252000:125485612548561255611756Methylomonas methanica MC09 chromosome, complete genomeIstB domain-containing protein ATP-binding protein9e-1682.4
NC_007759:1028977:107383110738311074598768Syntrophus aciditrophicus SB, complete genomeATP binding protein9e-1682.4
NC_012691:1743038:177491317749131775668756Tolumonas auensis DSM 9187, complete genomeIstB domain protein ATP-binding protein2e-1580.9
NC_004578:3193490:319349031934903194245756Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy14, transposition helper protein2e-1580.9
NC_002678:4885790:488579048857904886293504Mesorhizobium loti MAFF303099, complete genometransposase5e-1579.7
NC_015850:2147682:214924121492412149999759Acidithiobacillus caldus SM-1 chromosome, complete genometransposition helper protein1e-1478.6
NC_015851:10915:109151091511670756Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceIstB helper protein, IS21 family1e-1478.6
NC_015851:181721:197134197134197889756Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceIstB helper protein, IS21 family1e-1478.6
NC_015851:89006:111461111461112216756Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceIstB helper protein, IS21 family1e-1478.6
NC_020304:1222000:124381212438121244549738Desulfocapsa sulfexigens DSM 10523, complete genomeDNA replication protein1e-1478.6
NC_020304:752012:768136768136768873738Desulfocapsa sulfexigens DSM 10523, complete genomeDNA replication protein1e-1478.6
NC_007951:2904644:292877629287762929525750Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase-related ATP-binding subunit5e-1476.3
NC_010084:2484000:250283925028392503588750Burkholderia multivorans ATCC 17616 chromosome 1, completeIstB ATP binding domain-containing protein9e-1475.5
NC_010805:530876:557152557152557901750Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu3 transposase9e-1475.5
NC_010804:996837:102118510211851021934750Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu3 transposase9e-1475.5
NC_010086:1907959:191740319174031918152750Burkholderia multivorans ATCC 17616 chromosome 2, completeIstB domain protein ATP-binding protein9e-1475.5
NC_008740:1484531:150212615021261502866741Marinobacter aquaeolei VT8, complete genomeIstB domain protein ATP-binding protein2e-1374.7
NC_014153:1663597:166475916647591665496738Thiomonas intermedia K12 chromosome, complete genomeIstB domain protein ATP-binding protein2e-1374.7
NC_010801:550270:587514587514588263750Burkholderia multivorans ATCC 17616 chromosome 3, completeIS408a transposase2e-1374.3
NC_010086:1816378:184838818483881849137750Burkholderia multivorans ATCC 17616 chromosome 2, completeIstB domain protein ATP-binding protein2e-1374.3
NC_010805:575709:626167626167626916750Burkholderia multivorans ATCC 17616 chromosome 2, completeIS408a transposase2e-1374.3
NC_010801:421906:432829432829433578750Burkholderia multivorans ATCC 17616 chromosome 3, completeIS408b transposase2e-1374.3
NC_010087:319063:336595336595337344750Burkholderia multivorans ATCC 17616 chromosome 3, completeIstB domain protein ATP-binding protein2e-1374.3
NC_009255:1105786:112859611285961129345750Burkholderia vietnamiensis G4 chromosome 2, complete sequenceIstB ATP binding domain-containing protein2e-1374.3
NC_013854:513196:530982530982531485504Azospirillum sp. B510, complete genometransposase5e-1372.8
NC_013856:595496:601855601855602610756Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase9e-1372.4
NC_013860:171235:186397186397187152756Azospirillum sp. B510 plasmid pAB510f, complete sequencetransposase9e-1372.4
NC_013854:3200912:320497332049733205728756Azospirillum sp. B510, complete genometransposase9e-1372.4
NC_007508:2783443:279721127972112797954744Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative IstB-like ATP binding protein1e-1272
NC_009253:2315958:233210323321032332861759Desulfotomaculum reducens MI-1 chromosome, complete genomeIstB ATP binding domain-containing protein1e-1272
NC_009253:3272000:327563832756383276396759Desulfotomaculum reducens MI-1 chromosome, complete genomeIstB ATP binding domain-containing protein1e-1272
NC_010529:296500:296532296532297287756Cupriavidus taiwanensis plasmid pRALTA, complete sequencetransposase, IS21 family9e-1372
NC_008563:3119284:313694331369433137692750Escherichia coli APEC O1, complete genomeISEc12 putative ATP-binding protein9e-1372
NC_008577:1455000:146549414654941466249756Shewanella sp. ANA-3 chromosome 1, complete sequenceIstB domain protein ATP-binding protein1e-1271.6
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete4e-1270.1
NC_004463:1872537:187437718743771875108732Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-1168.6
NC_009350:137645:140946140946141701756Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completetransposase subunit 21e-1168.6
NC_009348:3029963:305108530510853051840756Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 21e-1168.6
NC_009348:1064664:107869010786901079445756Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 21e-1168.6
NC_009348:47974:630826308263837756Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 21e-1168.6
NC_009348:2125698:214434621443462145101756Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 21e-1168.6
NC_010623:1871492:192843819284381929196759Burkholderia phymatum STM815 chromosome 2, complete sequenceIstB domain protein ATP-binding protein1e-1168.2
NC_017249:8427163:844942384494238450133711Bradyrhizobium japonicum USDA 6, complete genometransposase2e-1168.2
NC_017249:8221992:827063182706318271341711Bradyrhizobium japonicum USDA 6, complete genometransposase2e-1168.2
NC_007948:1972290:199903519990351999772738Polaromonas sp. JS666, complete genomeIstB-like ATP-binding protein2e-1167.8
NC_015554:3696970:370308237030823703633552Alteromonas sp. SN2 chromosome, complete genomeIstB ATP binding domain-containing protein3e-1167
NC_009428:1827352:185347618534761854207732Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeIstB ATP binding domain-containing protein4e-1167
NC_015554:4724245:474236947423694743133765Alteromonas sp. SN2 chromosome, complete genomeIstB ATP binding domain-containing protein4e-1166.6
NC_009348:1475955:153250215325021533257756Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 24e-1166.6
NC_015554:4824000:482614948261494826880732Alteromonas sp. SN2 chromosome, complete genomeIstB ATP binding domain-containing protein4e-1166.6
NC_008782:1917634:193913019391301939867738Acidovorax sp. JS42, complete genomeIstB domain protein ATP-binding protein4e-1166.6
NC_014219:3188128:321070032107003211446747Bacillus selenitireducens MLS10 chromosome, complete genomeIstB domain protein ATP-binding protein6e-1166.2
NC_012792:547967:562507562507563256750Variovorax paradoxus S110 chromosome 2, complete genomeIstB domain protein ATP-binding protein6e-1166.2
NC_014825:165701:165701165701166468768Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceIstB domain protein ATP-binding protein8e-1165.9
NC_015186:535727:554117554117554869753Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element1e-1065.5
NC_009484:318500:323464323464324210747Acidiphilium cryptum JF-5 chromosome, complete genomeIstB ATP binding domain-containing protein1e-1065.1
NC_016812:258500:268531268531269268738Sinorhizobium fredii HH103, complete genomeputative insertion sequence ATP-binding protein y4bM/y4kI/y4tA6e-1062.8
NC_016812:4246542:425296342529634253700738Sinorhizobium fredii HH103, complete genomeputative insertion sequence ATP-binding protein y4bM/y4kI/y4tA6e-1062.8
NC_016815:844350:862116862116862853738Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceputative insertion sequence ATP-binding protein y4bM/y4kI/y4tA6e-1062.8
NC_007384:1086025:109131210913121092067756Shigella sonnei Ss046, complete genomeputative transposase subunit1e-0962
NC_007384:1763375:176707917670791767834756Shigella sonnei Ss046, complete genomeputative transposase subunit1e-0962
NC_016822:1839739:184506518450651845820756Shigella sonnei 53G, complete genometransposase subunit1e-0962
NC_016822:267758:277125277125277880756Shigella sonnei 53G, complete genometransposase subunit1e-0962
NC_016822:2940000:295855729585572959312756Shigella sonnei 53G, complete genometransposase subunit1e-0962
NC_017325:967598:983188983188983925738Sinorhizobium meliloti SM11 chromosome, complete genomeTRm23b IS ATP-binding protein1e-0962
NC_012660:2045398:206342820634282064177750Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase subunit B2e-0961.2
NC_012586:897148:915486915486916223738Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative ATP-binding protein of disrupted insertion sequence4e-0960.5
NC_010805:575709:635169635169635927759Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu30 transposase2e-0858.2
NC_010086:1816378:183937718393771840135759Burkholderia multivorans ATCC 17616 chromosome 2, completeIstB domain protein ATP-binding protein2e-0858.2
NC_008095:4189082:421252242125224213283762Myxococcus xanthus DK 1622, complete genometransposition helper protein, IS21 family3e-0857.4
NC_008095:2497842:250768725076872508448762Myxococcus xanthus DK 1622, complete genometransposition helper protein, IS21 family3e-0857.4
NC_019968:175480:190524190524191312789Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA replication protein1e-0755.5
NC_016589:183432:194873194873195640768Burkholderia sp. YI23 chromosome 1, complete sequenceIstB ATP binding domain-containing protein1e-0755.5
NC_009348:1347500:136014513601451360852708Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 22e-0754.7
NC_015757:2343193:236979123697912369955165Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein2e-0754.3
NC_015160:3729628:373242237324223733210789Odoribacter splanchnicus DSM 20712 chromosome, complete genomeIstB domain protein ATP-binding protein3e-0753.9
NC_015160:1467445:148148614814861482274789Odoribacter splanchnicus DSM 20712 chromosome, complete genomeIstB domain protein ATP-binding protein3e-0753.9
NC_016812:3641786:366212736621273662903777Sinorhizobium fredii HH103, complete genomeinsertion sequence IS21 putative ATP-binding protein4e-0753.5
NC_012586:922095:923602923602924393792Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase number 2 for insertion sequence NGRIS-3e2e-0651.2
NC_000914:198000:217670217670218461792Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceY4kI2e-0651.2
NC_012587:2298324:231650723165072317283777Rhizobium sp. NGR234, complete genomeputative transposase number 2 for insertion sequence NGRIS-3g2e-0651.2