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Query: NC_006177:46745:64888 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 64888, End: 65106, Length: 219

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006177:280234:3076823076823092081527Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit1e-29128
NC_006177:2883476:2894345289434528958711527Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit8e-29125
NC_006177:1422932:143417414341741434545372Symbiobacterium thermophilum IAM 14863, complete genometransposase-like protein2e-25114
NC_009434:3611738:3683250368325036847641515Pseudomonas stutzeri A1501, complete genomeISPsy14, transposase3e-1580.5
NC_015740:2614317:2635592263559226371061515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_015740:3631326:3654574365457436560881515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_015740:4072415:4078101407810140796151515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_015740:2407500:2438489243848924400031515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_015740:3631326:3632727363272736342411515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_015740:141910:1566021566021581161515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit4e-1580.1
NC_009434:608765:6498756498756513891515Pseudomonas stutzeri A1501, complete genomeISPsy14, transposase9e-1579
NC_008738:1:1630116301178421542Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequenceIntegrase, catalytic region7e-1475.9
NC_008740:2989856:2990543299054329920841542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region7e-1475.9
NC_008750:1253354:1263607126360712651481542Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region7e-1475.9
NC_008740:3520500:3531509353150935330501542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region7e-1475.9
NC_008740:4109000:4109567410956741111081542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region7e-1475.9
NC_020304:752012:7688947688947704471554Desulfocapsa sulfexigens DSM 10523, complete genometransposase3e-1270.9
NC_020304:1222000:1242238124223812437911554Desulfocapsa sulfexigens DSM 10523, complete genometransposase3e-1270.9
NC_007645:6350079:6367193636719363687341542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family5e-1269.7
NC_007645:6461267:6474373647437364759141542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family5e-1269.7
NC_007645:5747721:5749500574950057510411542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family5e-1269.7
NC_009428:1827352:1854220185422018557521533Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeintegrase catalytic subunit1e-1168.6
NC_014394:738365:7499867499867515061521Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region1e-1168.6
NC_015711:8964410:121712171708492Myxococcus fulvus HW-1 chromosome, complete genomeIS21 family transposase4e-1166.6
NC_005139:518760:532848532848533078231Vibrio vulnificus YJ016 chromosome I, complete sequenceputative transposase4e-1166.6
NC_002678:4885790:489044648904464891153708Mesorhizobium loti MAFF303099, complete genometransposase9e-1165.5
NC_009784:1231791:1231791123179112333231533Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein1e-1065.1
NC_015633:2801321:2816080281608028176121533Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase2e-1064.3
NC_012691:1743038:1773360177336017749011542Tolumonas auensis DSM 9187, complete genomeIntegrase catalytic region3e-1063.5
NC_009349:78000:8019980199817401542Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetransposase subunit 17e-1062.8
NC_016812:258500:2692812692812708311551Sinorhizobium fredii HH103, complete genomeputative transposase for insertion sequence IS4087e-1062.8
NC_016812:4246542:4251400425140042529501551Sinorhizobium fredii HH103, complete genomeputative transposase for insertion sequence IS4087e-1062.8
NC_016815:1543308:1543308154330815448581551Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTransposase for insertion sequence IS1326/IS13537e-1062.8
NC_016815:844350:8628668628668644161551Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTransposase for insertion sequence IS1326/IS13537e-1062.8
NC_008740:3520500:3521536352153635230801545Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-0962
NC_009348:1064664:1077134107713410786751542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_009348:47974:6152661526630671542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_008740:683081:6830816830816846251545Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-0962
NC_009348:2125698:2145116214511621466571542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_008740:443274:4665664665664681101545Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-0962
NC_009348:1475955:1530946153094615324871542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_009348:3029963:3051855305185530533961542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_009350:137645:1393901393901409311542Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completetransposase subunit 11e-0962
NC_009348:1347500:1358541135854113600821542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 11e-0962
NC_008577:1455000:1463938146393814654791542Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region1e-0961.6
NC_008740:220642:2331842331842347281545Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region2e-0961.2
NC_008740:1815743:1826754182675418282981545Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region2e-0961.2
NC_008740:1484531:1502877150287715044181542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region3e-0960.8
NC_016812:3641786:3663067366306736646171551Sinorhizobium fredii HH103, complete genomeputative transposase y4uI3e-0960.8
NC_012586:897148:920288920288921106819Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceTrm23a-like transposase, amino-terminus3e-0960.5
NC_012587:2326000:232910923291092329927819Rhizobium sp. NGR234, complete genomeamino-terminus of transposase TRm23a-like protein3e-0960.5
NC_008095:2497842:2505965250596525075031539Myxococcus xanthus DK 1622, complete genometransposase, IS21 family4e-0960.5
NC_008095:4189082:4213467421346742150051539Myxococcus xanthus DK 1622, complete genometransposase, IS21 family4e-0960.5
NC_017325:967598:9816259816259831751551Sinorhizobium meliloti SM11 chromosome, complete genomeTRm23a transposase5e-0959.7
NC_017249:8221992:8271347827134782727051359Bradyrhizobium japonicum USDA 6, complete genometransposase2e-0858.2
NC_017249:8427163:8448059844805984494171359Bradyrhizobium japonicum USDA 6, complete genometransposase2e-0858.2
NC_015186:535727:5525885525885541051518Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-0857.4
NC_012587:2298324:2314945231494523164951551Rhizobium sp. NGR234, complete genomeputative transposase number 1 for insertion sequence NGRIS-3g3e-0857.4
NC_000914:198000:2184582184582200081551Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceY4kJ3e-0857.4
NC_012586:922095:9243909243909259401551Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase number 1 for insertion sequence NGRIS-3e3e-0857.4
NC_013860:171235:1871631871631886771515Azospirillum sp. B510 plasmid pAB510f, complete sequencetransposase5e-0856.6
NC_013854:3200912:3203448320344832049621515Azospirillum sp. B510, complete genometransposase5e-0856.6
NC_013856:595496:6003306003306018441515Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase5e-0856.6
NC_009255:1105786:1127023112702311285791557Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit6e-0856.2
NC_010805:575709:6269336269336284891557Burkholderia multivorans ATCC 17616 chromosome 2, completeIS408a transposase6e-0856.2
NC_010087:319063:3350223350223365781557Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region6e-0856.2
NC_010801:550270:5882805882805898361557Burkholderia multivorans ATCC 17616 chromosome 3, completeIS408a transposase6e-0856.2
NC_010086:1816378:1846815184681518483711557Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region6e-0856.2
NC_014228:3534378:3551654355165435531981545Xenorhabdus nematophila ATCC 19061, complete genometransposase1e-0755.1
NC_014228:1712339:1722894172289417244381545Xenorhabdus nematophila ATCC 19061, complete genometransposase1e-0755.1
NC_016822:267758:2755732755732771081536Shigella sonnei 53G, complete genometransposase2e-0754.7
NC_016822:2940000:2957005295700529585401536Shigella sonnei 53G, complete genometransposase2e-0754.7
NC_016822:1839739:1845837184583718473721536Shigella sonnei 53G, complete genometransposase2e-0754.7
NC_007384:1763375:1767851176785117693861536Shigella sonnei Ss046, complete genomeputative transposase2e-0754.7
NC_007384:1086025:1092084109208410936191536Shigella sonnei Ss046, complete genomeputative transposase2e-0754.7
NC_008563:3119284:3137704313770431392451542Escherichia coli APEC O1, complete genomeputative transposase for ISEc122e-0754.7
NC_010660:33109:373143731437610297Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-0754.3
NC_013854:513196:5314965314965330101515Azospirillum sp. B510, complete genometransposase2e-0754.3
NC_012918:2569681:257983325798332580009177Geobacter sp. M21 chromosome, complete genome2e-0754.3
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF14e-0753.5
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF14e-0753.5
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF14e-0753.5
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF14e-0753.5
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF14e-0753.5
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF14e-0753.5
NC_009253:2315958:2330566233056623321251560Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit4e-0753.5
NC_009253:3272000:3276374327637432779331560Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit4e-0753.5
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF15e-0753.1
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF14e-0753.1
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF14e-0753.1
NC_016002:2946702:2968399296839929699551557Pseudogulbenkiania sp. NH8B, complete genometransposase7e-0752.8
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc86e-0752.8
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-0752.8
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF16e-0752.8
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-0752.8
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA6e-0752.8
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0752.8
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0752.8
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6836e-0752.8
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0752.8
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0752.8
NC_015388:719669:730505730505730624120Desulfobacca acetoxidans DSM 11109 chromosome, complete genome1e-0652
NC_007948:1972290:1997460199746019989981539Polaromonas sp. JS666, complete genomeIntegrase, catalytic region1e-0652
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF12e-0651.2
NC_010084:2484000:2501273250127325028231551Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase catalytic region3e-0650.8
NC_010805:530876:5555865555865571361551Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu3 transposase3e-0650.8
NC_010804:996837:1021950102195010235001551Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu3 transposase3e-0650.8
NC_010086:1907959:1918168191816819197181551Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region3e-0650.8
NC_007951:2904644:2927207292720729287601554Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase8e-0649.3