Pre_GI: BLASTP Hits

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Query: NC_006177:324363:351742 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 351742, End: 352854, Length: 1113

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011060:1746000:1758864175886417599041041Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein, Csd2 family1e-64246
NC_015387:261799:271091271091271960870Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Csd2 family4e-61235
NC_011963:1979136:199194619919461992821876Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, TM1801 family9e-60231
NC_015976:1893076:191239219123921913324933Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Csd26e-58224
NC_007512:1459685:147014414701441471043900Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated TM1801 family protein1e-48194
NC_007777:3962000:396822539682253969112888Frankia sp. CcI3, complete genomeCRISPR-associated protein TM18014e-48192
NC_009337:1448607:145836814583681459216849Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated Csd2 family protein6e-47188
NC_007947:621213:629533629533630414882Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein TM18012e-46186
NC_014221:1786122:179380717938071794706900Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Csd2 family1e-45184
NC_013204:2305140:231453823145382315437900Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein, Csd2 family5e-45181
NC_008741:15699:347513475135623873Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein, Csd2 family6e-45181
NC_009615:1354122:137740113774011378252852Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-44179
NC_005085:1269787:129030112903011291167867Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-43176
NC_014364:1116439:112523511252351126101867Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein, Csd2 family6e-43175
NC_016012:665171:667689667689668555867Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated Csh2 family protein1e-42174
NC_014484:447889:458002458002458877876Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein, Csd2 family1e-42173
NC_015677:3685452:369631836963183697199882Ramlibacter tataouinensis TTB310 chromosome, complete genomeCRISPR-associated protein3e-42172
NC_020126:9726992:973525597352559736166912Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated RAMP Csd3 family protein4e-42172
NC_017511:602000:612766612766613308543Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein2e-41170
NC_014960:1380500:138634113863411387207867Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-41169
NC_013740:842841:879139879139880035897Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein, Csd2 family4e-41168
NC_013947:3785332:379300337930033793884882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCsd2 family CRISPR-associated protein8e-40164
NC_019968:8397:182361823619081846Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG7e-38158
NC_019673:2051363:208995220899522090824873Saccharothrix espanaensis DSM 44229 complete genomeCsd2 family CRISPR-associated protein3e-33142
NC_014933:3637172:366008436600843661010927Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated protein, Csd2 family3e-33142
NC_007759:2748000:275523727552372756112876Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein1e-1997.8
NC_021175:353292:361756361756362607852Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein csd29e-1994.7
NC_012470:1606000:160825416082541609102849Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein2e-1790.5
NC_010381:92000:105341105341106198858Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencehypothetical protein3e-1789.7
NC_010610:1385066:139588013958801396758879Lactobacillus fermentum IFO 3956, complete genomehypothetical protein7e-1685.1
NC_016630:28410:384323843239274843Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein, Csd2 family3e-1582.8
NC_016584:1912000:192345219234521924306855Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG4e-1582.8
NC_017203:179468:181390181390182250861Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,CRISPR-associated protein, Csd21e-1378.2
NC_014098:2735500:2743385274338527444731089Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated protein, CT1132 family1e-1377.8
NC_017218:1655009:166345516634551664306852Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein3e-1376.3
NC_009523:5438000:544446354444635445437975Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Csd2 family protein1e-1274.3
NC_006513:1949751:195637119563711957213843Azoarcus sp. EbN1, complete genomehypothetical protein1e-1274.3
NC_015416:2723189:275445027544502755370921Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated protein, Csh2 family3e-1273.2
NC_008942:815280:830976830976831899924Methanocorpusculum labreanum Z, complete genomehypothetical protein4e-1272.8
NC_014915:332784:342897342897343853957Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein, Csh2 family7e-1272
NC_012438:776260:793609793609794556948Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated protein, Csh2 family4e-1169.7
NC_010995:2798000:280438928043892805222834Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein, Csd2 family6e-1168.9
NC_007681:482445:484255484255485214960Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein1e-1068.2
NC_021184:823000:826502826502827458957Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI1e-1068.2
NC_014209:2204515:222095722209572221871915Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein, Csh2 family2e-1067.4
NC_008618:1456000:146432914643291465174846Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein TM18012e-0963.9
NC_017161:1117741:112971711297171130619903Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCsh2 family CRISPR-associated protein2e-0757.4
NC_013799:1117750:112985911298591130761903Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated protein2e-0757.4
NC_017278:258921:263781263781264740960Thermus sp. CCB_US3_UF1 chromosome, complete genomeCRISPR-associated protein, Csh22e-0757
NC_015589:3053504:306629630662963067273978Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Csh2 family3e-0756.6
NC_019897:3251639:329013032901303291092963Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein, CT1132 family4e-0756.2
NC_012030:81837:8183781837828591023Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeCRISPR-associated protein, Csh2 family5e-0755.8
NC_015387:2072237:207773320777332078656924Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Csh2 family6e-0755.5
NC_013526:567500:574746574746575705960Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Csh2 family9e-0651.6