Pre_GI: BLASTP Hits

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Query: NC_006177:324363:347096 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 347096, End: 349255, Length: 2160

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015387:261799:2664582664582685932136Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase0759
NC_020126:9726992:9738646973864697408802235Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated helicase Cas35e-123442
NC_004757:905417:9093379093379113792043Nitrosomonas europaea ATCC 19718, complete genomeDEAD/DEAH box helicase:HD domain5e-119429
NC_014221:1786122:1788888178888817912062319Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated helicase Cas32e-115416
NC_011060:1746000:1754304175430417565232220Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated helicase Cas32e-114414
NC_014484:447889:4532194532194555282310Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein2e-113410
NC_019673:2051363:2085060208506020872942235Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas3 family protein protein1e-110400
NC_014960:1380500:1389942138994213931483207Anaerolinea thermophila UNI-1, complete genomehypothetical protein8e-110398
NC_019968:8397:1357413574157692196Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD1e-108394
NC_009615:1354122:1372739137273913749642226Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase4e-108392
NC_007777:3962000:3963334396333439655892256Frankia sp. CcI3, complete genomeCRISPR-associated helicase Cas3, core9e-108391
NC_015677:3685452:3691484369148436937722289Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein7e-107388
NC_007512:1459685:1465575146557514676532079Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated helicase Cas3, core2e-106387
NC_014364:1116439:1120569112056911227942226Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated helicase Cas34e-106386
NC_015873:2197412:2197412219741221996042193Megasphaera elsdenii DSM 20460, complete genomemetal dependent phosphohydrolase5e-106385
NC_009337:1448607:1453899145389914558961998Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein9e-104378
NC_005085:1269787:1285455128545512875362082Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-103376
NC_013204:2305140:2318079231807923202772199Eggerthella lenta DSM 2243, complete genomemetal dependent phosphohydrolase1e-102374
NC_007947:621213:6246826246826269192238Methylobacillus flagellatus KT, complete genomemetal dependent phosphohydrolase4e-101369
NC_011963:1979136:1986779198677919890132235Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated helicase, Cas3 family3e-100366
NC_013947:3785332:3796425379642537987042280Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCRISPR-associated helicase Cas32e-94347
NC_015976:1893076:1907423190742319097742352Sphingobium sp. SYK-6, complete genomeCRISPR-associated helicase Cas32e-93343
NC_013740:842841:8744968744968766822187Acidaminococcus fermentans DSM 20731, complete genomemetal dependent phosphohydrolase2e-90333
NC_009523:5438000:5448155544815554508692715Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated helicase Cas31e-83311
NC_010995:2798000:2807956280795628104092454Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated helicase Cas3 domain protein1e-80301
NC_006513:1949751:1959781195978119622672487Azoarcus sp. EbN1, complete genomepredicted CRISPR-associated helicase3e-77290
NC_007759:2748000:2758821275882127613282508Syntrophus aciditrophicus SB, complete genomeATP-dependent RNA helicase1e-76288
NC_008618:1456000:1468122146812214705392418Bifidobacterium adolescentis ATCC 15703, complete genomepredicted CRISPR-associated helicase1e-70268
NC_013714:1830959:1842567184256718451102544Bifidobacterium dentium Bd1, complete genomeCRISPR-associated helicase Cas32e-69264
NC_017218:1655009:1666981166698116694192439Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeCRISPR-associated helicase Cas32e-68261
NC_021175:353292:3564363564363588502415Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein6e-65249
NC_008942:815280:8345898345898370932505Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-64246
NC_010610:1385066:1400770140077014032082439Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-60234
NC_016630:28410:3300133001355892589Filifactor alocis ATCC 35896 chromosome, complete genomeATP-dependent RNA helicase3e-58227
NC_016584:1912000:1918122191812219205692448Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD3e-57223
NC_012470:1606000:1612460161246016149132454Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated helicase8e-51202
NC_007681:482445:4859174859174883042388Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase2e-47191
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein6e-45182
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas34e-44179
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein2e-43177
NC_010003:2056000:2075621207562120778132193Petrotoga mobilis SJ95, complete genomeCRISPR-associated helicase Cas31e-42175
NC_008148:258292:2745562745562770212466Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated helicase Cas3, core2e-42174
NC_013799:1117750:1126830112683011291362307Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated helicase1e-41172
NC_017161:1117741:1126688112668811289942307Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated helicase Cas31e-41172
NC_017278:258921:2589212589212611582238Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein6e-42172
NC_014098:2735500:2740062274006227426232562Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated helicase Cas39e-41169
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas33e-39164
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)2e-38161
NC_021184:823000:8283508283508306982349Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD5e-38160
NC_013526:567500:5765085765085790842577Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated helicase Cas39e-36152
NC_015387:2072237:2079360207936020816362277Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase2e-35151
NC_003901:678340:6852926852926877242433Methanosarcina mazei Go1, complete genomehypothetical protein2e-34147
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas35e-34146
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas33e-33144
NC_007681:1082000:1085878108587810886312754Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase3e-32140
NC_009715:873280:8808488808488830222175Campylobacter curvus 525.92 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-30135
NC_014935:1047411:1058060105806010602372178Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated helicase, cas3 family3e-30134
NC_019897:3251639:3287049328704932894392391Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated helicase Cas35e-30133
NC_021184:504728:5252555252555276392385Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-28127
NC_015589:3053504:3063199306319930655742376Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated HD domain-containing protein2e-27124
NC_014624:140000:1452031452031477882586Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-26120
NC_015757:2343193:2373204237320423755702367Sulfobacillus acidophilus TPY chromosome, complete genomeCRISPR-associated helicase Cas39e-26119
NC_016884:3219030:3251274325127432536402367Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCRISPR-associated HD domain-containing protein9e-26119
NC_007955:1198994:1207778120777812104202643Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated helicase Cas32e-23111
NC_016609:5986500:5992325599232559950962772Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated HD domain-containing protein2e-23111
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase6e-1996.7
NC_015634:2492771:2505441250544125079872547Bacillus coagulans 2-6 chromosome, complete genomeCRISPR-associated endonuclease Cas1e-1895.9
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas32e-1894.7
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein6e-1893.2
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein7e-1892.8
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas36e-1686.7
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas36e-1686.7
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas36e-1686.7
NC_000916:983500:1001172100117210036642493Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein1e-1585.5
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas32e-1584.7
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein3e-1584.3
NC_016051:460624:4687704687704713762607Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated helicase Cas35e-1583.6
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas33e-1480.9
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas36e-1480.1
NC_017096:260333:2653822653822676282247Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein4e-1377
NC_010803:483713:4952324952324974842253Chlorobium limicola DSM 245, complete genomeCRISPR-associated helicase Cas32e-1275.1
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas32e-1275.1
NC_010424:1356000:1362881136288113652682388Candidatus Desulforudis audaxviator MP104C, complete genomeCRISPR-associated helicase Cas32e-1274.7
NC_020134:2067476:2074883207488320770962214Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas34e-1273.9
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein3e-1170.9
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative1e-1068.9
NC_015975:1056731:1070620107062010729322313Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated helicase Cas33e-0964.7
NC_015435:1010973:1034037103403710355331497Metallosphaera cuprina Ar-4 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein7e-0963.2
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase9e-0962.8
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas32e-0862
NC_013510:1023348:1039357103935710424403084Thermomonospora curvata DSM 43183, complete genomemetal dependent phosphohydrolase3e-0861.2
NC_015573:2975000:2983739298373929862492511Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCRISPR-associated helicase Cas34e-0860.5
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD4e-0860.5
NC_000854:770000:7787457787457804571713Aeropyrum pernix K1, complete genomeCRISPR-associated helicase Cas37e-0756.6
NC_013849:1595924:1614550161455016161781629Ferroglobus placidus DSM 10642 chromosome, complete genomeCRISPR-associated helicase Cas31e-0656.2
NC_011978:699500:7103537103537115461194Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family3e-0654.3
NC_015737:2146953:2151963215196321547312769Clostridium sp. SY8519, complete genomeputative helicase4e-0653.9
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas34e-0653.9
NC_015518:1569936:1579373157937315808301458Acidianus hospitalis W1 chromosome, complete genomeCRISPR-associated helicase Cas38e-0653.1