Pre_GI: BLASTP Hits

Some Help

Query: NC_006177:2211458:2233314 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 2233314, End: 2234210, Length: 897

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014831:1906691:1922629192262919236481020Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotoheme IX farnesyltransferase6e-53207
NC_013161:212941:235136235136236107972Cyanothece sp. PCC 8802, complete genomeprotoheme IX farnesyltransferase9e-49194
NC_011726:213956:234955234955235926972Cyanothece sp. PCC 8801, complete genomeprotoheme IX farnesyltransferase1e-48193
NC_011884:1029328:104392110439211044895975Cyanothece sp. PCC 7425, complete genomeprotoheme IX farnesyltransferase1e-48193
NC_013124:1784117:179765217976521798545894Acidimicrobium ferrooxidans DSM 10331, complete genomeprotoheme IX farnesyltransferase1e-46187
NC_016830:81382:943229432295221900Pseudomonas fluorescens F113 chromosome, complete genomeprotein CtaB4e-45181
NC_006677:2042387:204238720423872043337951Gluconobacter oxydans 621H, complete genomeprotoheme IX farnesyltransferase6e-45181
NC_015379:89441:108850108850109749900Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative protoheme IX farnesyltransferase3e-43175
NC_015387:1965711:1967458196745819692811824Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeProtoheme IX farnesyltransferase4e-43175
NC_006370:166000:1780171780171790481032Photobacterium profundum SS9 chromosome 1, complete sequenceprotoheme IX farnesyltransferase6e-42171
NC_014315:3278386:328155832815583282457900Nitrosococcus watsoni C-113 chromosome, complete genomeprotoheme IX farnesyltransferase7e-41167
NC_005955:427142:443031443031443966936Bartonella quintana str. Toulouse, complete genomeprotoheme IX farnesyltransferase8e-41167
NC_007484:3429140:343528634352863436185900Nitrosococcus oceani ATCC 19707, complete genomeProtoheme IX farnesyltransferase3e-40165
NC_015563:3074691:309197030919703092875906Delftia sp. Cs1-4 chromosome, complete genomeprotoheme IX farnesyltransferase2e-38159
NC_004757:1089057:109800210980021098898897Nitrosomonas europaea ATCC 19718, complete genomeprotoheme IX farnesyltransferase3e-38159
NC_014012:207289:219014219014219928915Shewanella violacea DSS12, complete genomeprotoheme IX farnesyltransferase4e-37155
NC_013521:2193203:221636822163682217252885Sanguibacter keddieii DSM 10542, complete genomeprotoheme IX farnesyltransferase2e-36153
NC_013894:1380564:138139313813931382283891Thermocrinis albus DSM 14484 chromosome, complete genomeprotoheme IX farnesyltransferase3e-36152
NC_017278:48630:5038150381522071827Thermus sp. CCB_US3_UF1 chromosome, complete genomeProtoheme IX farnesyltransferase2e-36152
NC_015731:402280:416575416575417468894Nitrosomonas sp. Is79A3 chromosome, complete genomeProtoheme IX farnesyltransferase2e-35149
NC_012522:7596039:760104176010417602024984Rhodococcus opacus B4, complete genomeputative protoheme IX farnesyltransferase3e-35149
NC_013446:3034486:305666830566683057573906Comamonas testosteroni CNB-2, complete genomeprotoheme IX farnesyltransferase1e-34146
NC_009465:29735:311203112032013894Candidatus Vesicomyosocius okutanii HA, complete genomeprotoheme IX farnesyltransferase5e-34144
NC_014643:2056280:2105364210536421064431080Rothia dentocariosa ATCC 17931 chromosome, complete genomeprotoheme IX farnesyltransferase2e-33143
NC_020133:2886541:289006828900682891042975Mycobacterium liflandii 128FXT, complete genomecytochrome C oxidase assembly factor CtaB5e-33141
NC_015848:1647523:165833516583351659261927Mycobacterium canettii CIPT 140010059, complete genomeputative cytochrome C oxidase assembly factor CTAB5e-33141
NC_009565:1629780:163962516396251640551927Mycobacterium tuberculosis F11, complete genomecytochrome C oxidase assembly factor ctaB5e-33141
NC_016768:2764000:277422527742252775151927Mycobacterium tuberculosis KZN 4207 chromosome, complete genomecytochrome C oxidase assembly factor ctaB5e-33141
NC_002945:1621765:163161316316131632539927Mycobacterium bovis AF2122/97, complete genomeprotoheme IX farnesyltransferase7e-33140
NC_017190:1465079:152155415215541522471918Bacillus amyloliquefaciens LL3 chromosome, complete genomecytochrome caa3 oxidase assembly factor4e-32138
NC_016782:1251796:128402812840281284975948Corynebacterium diphtheriae 241 chromosome, complete genomeprotoheme IX farnesyltransferase6e-28124
NC_016783:1274000:130832813083281309275948Corynebacterium diphtheriae INCA 402 chromosome, complete genomeprotoheme IX farnesyltransferase6e-28124
NC_016786:1251765:128399712839971284944948Corynebacterium diphtheriae HC01 chromosome, complete genomeprotoheme IX farnesyltransferase6e-28124
NC_016802:1256287:128492812849281285875948Corynebacterium diphtheriae HC02 chromosome, complete genomeprotoheme IX farnesyltransferase6e-28124
NC_016800:1243000:131259613125961313543948Corynebacterium diphtheriae BH8 chromosome, complete genomeprotoheme IX farnesyltransferase6e-28124
NC_002935:1237585:131033913103391311271933Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein8e-28124
NC_015497:3614817:362195136219513622841891Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeprotoheme IX farnesyltransferase7e-27121
NC_009654:91096:103872103872104762891Marinomonas sp. MWYL1, complete genomeprotoheme IX farnesyltransferase2e-25116
NC_012779:2127542:213725521372552138145891Edwardsiella ictaluri 93-146, complete genomeprotoheme IX farnesyltransferase, putative8e-25114
NC_004741:366822:379600379600380487888Shigella flexneri 2a str. 2457T, complete genomeprotoheme IX farnesyltransferase2e-24113
NC_004337:367687:380467380467381354888Shigella flexneri 2a str. 301, complete genomeprotoheme IX farnesyltransferase2e-24113
NC_017328:385552:398331398331399221891Shigella flexneri 2002017 chromosome, complete genomeCytochrome o ubiquinol oxidase C subunit2e-24113
NC_004129:5781413:579132357913235792210888Pseudomonas fluorescens Pf-5, complete genomeprotoheme IX farnesyltransferase7e-24111
NC_008258:401786:418118418118419008891Shigella flexneri 5 str. 8401, complete genome9e-24110
NC_020181:2714559:272041427204142721301888Enterobacter aerogenes EA1509E, complete genomeHeme O synthase, protoheme IX farnesyltransferase COX10-CtaB2e-23109
NC_015663:2694373:272447827244782725365888Enterobacter aerogenes KCTC 2190 chromosome, complete genomeprotoheme IX farnesyltransferase2e-23109
NC_017259:480656:491870491870492745876Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,protoheme IX farnesyltransferase5e-22105
NC_014910:3727887:375135437513543752256903Alicycliphilus denitrificans BC chromosome, complete genomeprotoheme ix farnesyltransferase7e-22104
NC_016645:633988:6476246476246489131290Pyrobaculum sp. 1860 chromosome, complete genomeprenyltransferase8e-2097.8
NC_015703:3444025:345537034553703456245876Runella slithyformis DSM 19594 chromosome, complete genomeProtoheme IX farnesyltransferase7e-1994.7
NC_016510:1072709:107839510783951079300906Flavobacterium columnare ATCC 49512 chromosome, complete genomeprotoheme IX farnesyltransferase6e-1891.7
NC_002528:505951:512987512987513844858Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeprotohaeme IX farnesyltransferase1e-1790.5
NC_017253:509494:513879513879514745867Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,protoheme IX farnesyltransferase1e-1790.5
NC_013730:6901725:691304969130496913927879Spirosoma linguale DSM 74, complete genomeprotoheme IX farnesyltransferase2e-1789.7
NC_020054:1335699:134823613482361349141906Fibrella aestuarina BUZ 2 drat genomeprotoheme IX farnesyltransferase5e-1788.6
NC_004061:498483:514111514111514965855Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeprotoheme IX farnesyltransferase4e-1788.6
NC_018677:111500:146818146818147672855Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeHeme O synthase protoheme IX farnesyltransferase COX10-CtaB1e-1687.4
NC_015850:169180:191525191525192469945Acidithiobacillus caldus SM-1 chromosome, complete genomeheme O synthase, protoheme IX farnesyltransferase COX10-CtaB4e-1582.4
NC_015914:2658845:267112826711282672030903Cyclobacterium marinum DSM 745 chromosome, complete genomeProtoheme IX farnesyltransferase1e-1377.4
NC_015942:1824847:184796518479651848909945Acidithiobacillus ferrivorans SS3 chromosome, complete genomeProtoheme IX farnesyltransferase2e-1376.6
NC_014973:54449:553365533656181846Geobacter sp. M18 chromosome, complete genomeUbiA prenyltransferase4e-1375.5
NC_011761:2785660:282665628266562827600945Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeprotoheme IX farnesyltransferase2e-1273.2
NC_011206:2685499:272649527264952727439945Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotoheme IX farnesyltransferase2e-1273.2
NC_015850:510837:534881534881535741861Acidithiobacillus caldus SM-1 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase7e-1064.7
NC_020209:4643901:466194846619484662838891Pseudomonas poae RE*1-1-14, complete genome4-hydroxybenzoate octaprenyltransferase1e-0964.3
NC_010682:3033646:303458130345813035423843Ralstonia pickettii 12J chromosome 1, complete sequence4-hydroxybenzoate polyprenyl transferase4e-0755.8
NC_012856:2633890:263389026338902634765876Ralstonia pickettii 12D chromosome 1, complete genome4-hydroxybenzoate polyprenyl transferase5e-0755.5
NC_002488:45219:6139561395623961002Xylella fastidiosa 9a5c, complete genome4-hydroxybenzoate octaprenyltransferase7e-0754.7
NC_009465:29735:814778147782346870Candidatus Vesicomyosocius okutanii HA, complete genome4-hydroxybenzoate octaprenyltransferase8e-0754.7
NC_014507:906960:943639943639944511873Methanoplanus petrolearius DSM 11571 chromosome, complete genomegeranylgeranylglycerol- phosphategeranylgeranyltransferase1e-0653.9
NC_013967:1289458:130765613076561308510855Haloferax volcanii DS2 chromosome, complete genome4-hydroxybenzoate octaprenyltransferase4e-0652.4
NC_010513:44886:605996059961498900Xylella fastidiosa M12 chromosome, complete genome4-hydroxybenzoate octaprenyltransferase8e-0651.2