Pre_GI: BLASTP Hits

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Query: NC_006177:1254635:1277572 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1277572, End: 1279251, Length: 1680

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008726:6393489:6428388642838864300641677Mycobacterium vanbaalenii PYR-1, complete genomebinding-protein-dependent transport systems inner membrane component2e-34147
NC_014364:1990000:2009000200900020108351836Spirochaeta smaragdinae DSM 11293 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component7e-33142
NC_012880:3748665:3784062378406237857741713Dickeya dadantii Ech703, complete genomebinding-protein-dependent transport systems inner membrane component1e-32141
NC_012914:336750:3396523396523414781827Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component1e-31138
NC_009012:1901492:1916130191613019177851656Clostridium thermocellum ATCC 27405, complete genomebinding-protein-dependent transport systems inner membrane component1e-29131
NC_010067:892729:9039379039379056431707Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-29129
NC_012225:1015452:1026109102610910277581650Brachyspira hyodysenteriae WA1, complete genomeputative permease BitE1e-28128
NC_014654:2277461:2281523228152322831541632Halanaerobium sp. 'sapolanicus' chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-28127
NC_015968:1618862:1622541162254116243641824Enterobacter asburiae LF7a chromosome, complete genomeABC transporter integral membrane subunit2e-27124
NC_014122:967194:9853829853829869891608Methanocaldococcus infernus ME chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-27124
NC_014364:1990000:2001878200187820035631686Spirochaeta smaragdinae DSM 11293 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-26120
NC_015276:1531159:1544555154455515463751821Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-25118
NC_009633:4733678:4742874474287447445501677Alkaliphilus metalliredigens QYMF chromosome, complete genomebinding-protein-dependent transport system inner membrane protein5e-25116
NC_014364:1990000:1992431199243119944732043Spirochaeta smaragdinae DSM 11293 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-24114
NC_013172:542896:5533635533635551261764Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, permease component2e-22107
NC_014306:2476316:2494946249494624971802235Erwinia billingiae Eb661, complete genomeconserved uncharacterized membrane-anchored protein5e-21103
NC_017179:3222015:3223250322325032249681719Clostridium difficile BI1, complete genomeABC transporter, permease protein6e-1996.3
NC_013315:3214063:3215298321529832170161719Clostridium difficile CD196 chromosome, complete genomeABC transporter permease6e-1996.3
NC_012563:1348500:1364737136473713664251689Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, permease protein8e-1892.4
NC_009718:1736300:1737412173741217387251314Fervidobacterium nodosum Rt17-B1, complete genome8e-1892.4
NC_014153:2187409:2192572219257221942301659Thiomonas intermedia K12 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-1789.7
NC_017297:1280963:1295389129538912970771689Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter permease5e-1789.7
NC_013446:4723380:4746600474660047483601761Comamonas testosteroni CNB-2, complete genomesulfate ABC transporter, permease protein1e-1275.1
NC_011852:211314:2135872135872156502064Haemophilus parasuis SH0165, complete genomeABC-type Fe3+ transport system, permease component2e-1274.7
NC_007948:4558000:4598283459828346000581776Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component5e-1273.2
NC_015684:2000771:2000771200077120025071737Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter permease8e-1272.4
NC_010582:1771591:1788392178839217899031512Streptococcus pneumoniae CGSP14, complete genomeABC transporter, permease protein3e-1170.9
NC_015591:1161007:1180170118017011820051836Sinorhizobium meliloti AK83 chromosome 3, complete sequenceABC transporter integral membrane protein3e-1170.5
NC_006510:2044347:205331820533182054250933Geobacillus kaustophilus HTA426, complete genomeABC transporter (permease)3e-1170.5
NC_015572:4576778:4583546458354645851441599Methylomonas methanica MC09 chromosome, complete genomeABC transporter integral membrane protein7e-1169.3
NC_007948:4646344:466299646629964663802807Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component8e-1169.3
NC_015680:930483:9489479489479505421596Pyrococcus yayanosii CH1 chromosome, complete genomeABC-type iron(III) transport system, permease3e-1067.4
NC_007643:889755:9053179053179069931677Rhodospirillum rubrum ATCC 11170, complete genomeBinding-protein-dependent transport systems inner membrane component4e-1066.6
NC_008391:2404443:241895124189512419745795Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component5e-1066.6
NC_009921:6421387:6435823643582364373521530Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component6e-1066.2
NC_014483:5015890:501668550166855017506822Paenibacillus polymyxa E681 chromosome, complete genomeABC-type spermidine/putrescine transport system, permease component I6e-1066.2
NC_008618:200017:208807208807209757951Bifidobacterium adolescentis ATCC 15703, complete genomesugar permease of ABC transporter system2e-0965.1
NC_010676:2793237:282934628293462830158813Burkholderia phytofirmans PsJN chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component2e-0964.7
NC_013524:969038:983292983292984143852Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component2e-0964.3
NC_014364:1263427:128027312802731281175903Spirochaeta smaragdinae DSM 11293 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0963.9
NC_007005:2686551:271080027108002711594795Pseudomonas syringae pv. syringae B728a, complete genomeBinding-protein-dependent transport systems inner membrane component2e-0861.2
NC_017506:1507943:1530464153046415320771614Marinobacter adhaerens HP15 chromosome, complete genomeiron(III) ABC transporter permease2e-0861.2
NC_008312:4358134:437846443784644379327864Trichodesmium erythraeum IMS101, complete genomebinding-protein-dependent transport systems inner membrane component2e-0861.2
NC_007948:4646344:466379946637994664671873Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component3e-0860.5
NC_013172:3141739:3147864314786431496001737Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, permease component4e-0860.5
NC_020210:3341976:335368833536883354608921Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter permease5e-0860.1
NC_009328:3322802:333449733344973335417921Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter permease4e-0860.1
NC_003318:183914:206427206427207188762Brucella melitensis 16M chromosome II, complete sequenceSPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTC4e-0860.1
NC_007802:3575739:361777736177773618712936Jannaschia sp. CCS1, complete genomebinding-protein-dependent transport systems inner membrane component4e-0860.1
NC_011982:206784:229784229784230641858Agrobacterium vitis S4 plasmid pTiS4, complete sequenceABC transporter membrane spanning protein (mannopine)4e-0860.1
NC_014483:5015890:501589050158905016678789Paenibacillus polymyxa E681 chromosome, complete genomeABC-type spermidine/putrescine transport system, permease component II5e-0859.7
NC_002678:4885790:4914291491429149160691779Mesorhizobium loti MAFF303099, complete genomeABC transporter, permease9e-0858.9
NC_008701:62931:7200472004738061803Pyrobaculum islandicum DSM 4184, complete genomebinding-protein-dependent transport systems inner membrane component1e-0758.9
NC_008391:2404443:241974224197422420722981Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component1e-0758.9
NC_003318:183914:205633205633206388756Brucella melitensis 16M chromosome II, complete sequenceSPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTB1e-0758.5
NC_016590:1380092:137923313792331380105873Burkholderia sp. YI23 chromosome 3, complete sequencebinding-protein-dependent transport system inner membrane protein1e-0758.5
NC_012491:648756:649595649595650395801Brevibacillus brevis NBRC 100599, complete genomeABC transporter permease protein1e-0758.5
NC_017514:1568591:1594301159430115958181518Neisseria meningitidis M01-240149 chromosome, complete genomeiron(III) ABC transporter permease1e-0758.5
NC_008314:477722:512112512112512933822Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, permease component: POPT family2e-0758.2
NC_012108:2542328:2562537256253725641621626Desulfobacterium autotrophicum HRM2, complete genomeThiP2e-0758.2
NC_018000:1914945:1918008191800819197321725Sinorhizobium fredii USDA 257 chromosome, complete genomespermidine/putrescine transport system permease PotB2e-0758.2
NC_016633:3402242:342356034235603424417858Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC-type spermidine/putrescine transport system, permease component II3e-0757.4
NC_015856:1271295:128846112884611289390930Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-0757.4
NC_010676:897801:898747898747899610864Burkholderia phytofirmans PsJN chromosome 2, complete sequence2-aminoethylphosphonate ABC transport system, membrane component PhnV3e-0757.4
NC_018000:1914945:1945154194515419462481095Sinorhizobium fredii USDA 257 chromosome, complete genomeinner membrane ABC-transporter permease protein3e-0757.4
NC_009778:1556222:155752915575291558419891Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0757
NC_009922:2721343:274313627431362743954819Alkaliphilus oremlandii OhILAs, complete genomebinding-protein-dependent transport systems inner membrane component5e-0756.6
NC_012032:398419:4134624134624151861725Chloroflexus sp. Y-400-fl, complete genomebinding-protein-dependent transport systems inner membrane component5e-0756.6
NC_010175:398453:4134964134964152201725Chloroflexus aurantiacus J-10-fl, complete genomebinding-protein-dependent transport systems inner membrane component5e-0756.6
NC_011566:4309151:4310182431018243118131632Shewanella piezotolerans WP3, complete genomeBinding-protein-dependent transport systems inner membrane component4e-0756.6
NC_012491:648756:648756648756649598843Brevibacillus brevis NBRC 100599, complete genomeABC transporter permease protein7e-0756.2
NC_016048:1930089:195642919564291957307879Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter permease protein1e-0655.5
NC_012917:3241196:3292938329293832945151578Pectobacterium carotovorum subsp. carotovorum PC1, complete genomebinding-protein-dependent transport systems inner membrane component1e-0655.5
NC_003888:6103534:6145467614546761471281662Streptomyces coelicolor A3(2), complete genomeABC transporter integral membrane protein1e-0655.5
NC_007952:1293024:129503612950361295899864Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC transporter, inner membrane subunit1e-0655.5
NC_013524:969038:982381982381983295915Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component1e-0655.5
NC_020260:1615135:161645116164511617332882Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0655.1
NC_013410:155236:176570176570177403834Fibrobacter succinogenes subsp. succinogenes S85 chromosome,sulfate ABC transporter, inner membrane subunit CysT2e-0655.1
NC_019897:1224798:123069812306981231534837Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter permease2e-0654.7
NC_011985:194973:210700210700211488789Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter2e-0654.7
NC_010677:707881:726609726609727415807Francisella tularensis subsp. mediasiatica FSC147, complete genomeATP-binding cassette putrescine uptake system, membrane protein, subunit I3e-0654.3
NC_015690:4592582:4604512460451246062241713Paenibacillus mucilaginosus KNP414 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0654.3
NC_014640:5897421:591020759102075911058852Achromobacter xylosoxidans A8 chromosome, complete genomebinding-protein-dependent transporter inner membrane component family protein 622e-0654.3
NC_016935:4326644:4344650434465043463621713Paenibacillus mucilaginosus 3016 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein2e-0654.3
NC_013526:835117:843304843304844233930Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component2e-0654.3
NC_009718:518873:5227915227915243381548Fervidobacterium nodosum Rt17-B1, complete genomebinding-protein-dependent transport systems inner membrane component3e-0653.9
NC_015416:525018:548279548279549172894Methanosaeta concilii GP-6 chromosome, complete genomemolybdate ABC transporter permease3e-0653.9
NC_013521:302574:334846334846335814969Sanguibacter keddieii DSM 10542, complete genomepermease component of ABC-type sugar transporter4e-0653.5
NC_016612:3361802:338158933815893382542954Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter membrane protein4e-0653.5
NC_003143:3346834:336798733679873368820834Yersinia pestis CO92, complete genomesulfate transport system permease protein CysT5e-0653.1
NC_010465:1550617:155351915535191554352834Yersinia pseudotuberculosis YPIII, complete genomesulfate ABC transporter, inner membrane subunit5e-0653.1
NC_006155:3212796:323258232325823233415834Yersinia pseudotuberculosis IP 32953, complete genomeABC sulfate transporter, permease subunit CysT5e-0653.1
NC_010159:2878499:289827128982712899104834Yersinia pestis Angola, complete genomesulfate/thiosulfate ABC transporter, permease protein CysT5e-0653.1
NC_004088:1622941:162582516258251626658834Yersinia pestis KIM, complete genomeinner membrane permease T of sulfate/thiosulfate ABC transporter5e-0653.1
NC_010634:3129174:315033431503343151167834Yersinia pseudotuberculosis PB1/+, complete genomesulfate ABC transporter, inner membrane subunit5e-0653.1
NC_008150:2451872:247301724730172473850834Yersinia pestis Antiqua, complete genomesulfate transport system permease protein CysT5e-0653.1
NC_005810:2905362:292651529265152927348834Yersinia pestis biovar Microtus str. 91001, complete genomesulfate/thiosulfate transporter subunit5e-0653.1
NC_009381:2373847:239361723936172394450834Yersinia pestis Pestoides F chromosome, complete genomesulfate/thiosulfate transporter subunit5e-0653.1
NC_014029:3401238:342239134223913423224834Yersinia pestis Z176003 chromosome, complete genomesulfate transport system permease CysT5e-0653.1
NC_017154:3344273:336542633654263366259834Yersinia pestis D106004 chromosome, complete genomesulfate transport system permease CysT5e-0653.1
NC_017160:3326199:334735233473523348185834Yersinia pestis D182038 chromosome, complete genomesulfate transport system permease CysT5e-0653.1
NC_007948:4620661:461975146197514620668918Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component5e-0653.1
NC_016945:666000:668873668873669568696Vibrio cholerae IEC224 chromosome II, complete sequencemolybdate ABC transporter permease7e-0652.8
NC_008686:405159:439692439692440477786Paracoccus denitrificans PD1222 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component6e-0652.8
NC_014217:3024961:302496130249613025788828Starkeya novella DSM 506 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-0652.8
NC_003911:253400:257886257886258806921Silicibacter pomeroyi DSS-3, complete genomeSN-glycerol-3-phosphate ABC transporter, permease protein9e-0652.4
NC_013971:1283942:131020213102021310891690Erwinia amylovora ATCC 49946 chromosome, complete genomemolybdenum ABC transporter permease9e-0652.4
NC_013961:1246454:127267212726721273361690Erwinia amylovora, complete genomemolybdate ABC transport system, permease component9e-0652.4
NC_009617:4805413:482852748285274829351825Clostridium beijerinckii NCIMB 8052 chromosome, complete genomesulfate ABC transporter permease1e-0552.4
NC_020453:1025891:103581210358121036654843Agromonas oligotrophica S58 DNA, complete genomeAttB-like ABC transporter permease protein1e-0552.4