Pre_GI: BLASTP Hits

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Query: NC_006177:1254635:1276505 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1276505, End: 1277575, Length: 1071

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3748665:378308237830823784059978Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 12e-33143
NC_010067:892729:902946902946903923978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-33141
NC_014153:2187409:219158521915852192571987Thiomonas intermedia K12 chromosome, complete genomeextracellular solute-binding protein family 14e-27122
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 12e-26120
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein1e-1997.4
NC_019940:1932906:195125019512501952245996Thioflavicoccus mobilis 8321 chromosome, complete genomeFe3+ ABC transporter substrate-binding protein2e-1687
NC_014364:1990000:199138319913831992369987Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysR substrate-binding protein1e-1584.7
NC_011313:871445:8886868886868897411056Aliivibrio salmonicida LFI1238 chromosome 2, complete sequenceextracellular solute-binding protein2e-1583.6
NC_015963:4500:2207422074231831110Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencefamily 1 extracellular solute-binding protein2e-1583.2
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein9e-1581.3
NC_012225:1015452:1023891102389110249101020Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitC4e-1479.3
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein5e-1479
NC_015680:930483:9469259469259479681044Pyrococcus yayanosii CH1 chromosome, complete genomethiamine-binding periplasmic protein6e-1479
NC_017179:3222015:3226058322605832271071050Clostridium difficile BI1, complete genomeABC transporter substrate-binding protein7e-1375.1
NC_013315:3214063:3218106321810632192271122Clostridium difficile CD196 chromosome, complete genomeABC transporter substrate-binding protein1e-1274.7
NC_014166:2149984:2168859216885921698811023Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1273.2
NC_012225:1015452:1022782102278210238101029Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB3e-1273.2
NC_013421:2720500:2725111272511127262321122Pectobacterium wasabiae WPP163, complete genomeextracellular solute-binding protein family 15e-1272.4
NC_009012:1901492:1919023191902319201291107Clostridium thermocellum ATCC 27405, complete genomeextracellular solute-binding protein, family 18e-1271.6
NC_015572:4576778:458515145851514586149999Methylomonas methanica MC09 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1271.6
NC_012912:2285778:2304614230461423057351122Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 11e-1171.2
NC_014306:2476316:2497276249727624983041029Erwinia billingiae Eb661, complete genomeABC transporter, periplasmic substrate-binding protein2e-1170.1
NC_014718:791528:8012338012338023361104Burkholderia rhizoxinica HKI 454 chromosome, complete genomeABC transporter substrate-binding protein2e-1170.1
NC_012225:1015452:102177610217761022747972Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitA3e-1169.7
NC_014500:2402881:2425037242503724261581122Dickeya dadantii 3937 chromosome, complete genomeFe3+ ABC transporter periplasmic protein5e-1168.9
NC_006177:2943259:2964845296484529659421098Symbiobacterium thermophilum IAM 14863, complete genomeiron ABC transporter substrate-binding protein2e-1067.4
NC_011000:1216430:1220139122013912211671029Burkholderia cenocepacia J2315 chromosome 1, complete sequenceextracellular solute-binding protein2e-1067.4
NC_014364:1990000:2000764200076420018251062Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 13e-1066.2
NC_010674:370629:3923483923483933851038Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, substrate-binding protein4e-1065.9
NC_010723:371741:3877433877433887921050Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, substrate-binding protein1e-0964.3
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)3e-0963.2
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein4e-0962.8
NC_012225:1015452:102063010206301021604975Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB4e-0962.4
NC_009633:4733678:4744609474460947456881080Alkaliphilus metalliredigens QYMF chromosome, complete genomeextracellular solute-binding protein9e-0961.6
NS_000195:1257834:1279723127972312807781056Candidatus Cloacamonas acidaminovoranshypothetical protein9e-0961.6
NC_013204:2371499:237930823793082380303996Eggerthella lenta DSM 2243, complete genomeABC-type transporter, periplasmic component2e-0860.5
NC_013204:2371499:237149923714992372389891Eggerthella lenta DSM 2243, complete genomeextracellular solute-binding protein family 12e-0860.1
NC_011658:5007691:5018884501888450199181035Bacillus cereus AH187 chromosome, complete genomeputative lipoprotein3e-0756.6
NC_016771:4962795:4971207497120749722411035Bacillus cereus NC7401, complete genomelipoprotein3e-0756.6
NC_009718:1771500:178332717833271784127801Fervidobacterium nodosum Rt17-B1, complete genomeiron ABC transporter substrate-binding protein3e-0756.6
NC_011969:4945441:4953853495385349548871035Bacillus cereus Q1 chromosome, complete genomelipoprotein5e-0755.8
NC_008321:3189974:3201113320111332024261314Shewanella sp. MR-4, complete genomeputative phosphoglycerate transport regulatory protein PgtC8e-0755.1
NC_010511:6756000:6756055675605567571191065Methylobacterium sp. 4-46 chromosome, complete genomeextracellular solute-binding protein8e-0755.1
NC_003909:4951444:4962650496265049636841035Bacillus cereus ATCC 10987, complete genomelipoprotein, putative1e-0654.7
NC_008600:5005345:5012457501245750134911035Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, substrate-binding protein3e-0653.1
NC_012472:5015621:5022733502273350237671035Bacillus cereus 03BB102, complete genomeputative lipoprotein3e-0653.1
NC_016751:1776669:179397517939751794946972Marinitoga piezophila KA3 chromosome, complete genomeABC transporter substrate-binding protein3e-0653.1
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein3e-0653.1
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein5e-0652.4
NC_016779:4969626:4976725497672549777591035Bacillus cereus F837/76 chromosome, complete genomeABC transporter substrate-binding protein6e-0652.4
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 157e-0652
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family8e-0651.6