Pre_GI: BLASTP Hits

Some Help

Query: NC_006177:1060428:1068252 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1068252, End: 1069493, Length: 1242

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:6296:1151311513127721260Clostridium saccharolyticum WM1 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase2e-81303
NC_016641:2291363:2305732230573223069641233Paenibacillus terrae HPL-003 chromosome, complete genomePTS system transporter subunit IIC9e-75281
NC_016641:373623:3871763871763884351260Paenibacillus terrae HPL-003 chromosome, complete genomePTS system transporter subunit IIC3e-57223
NC_013517:2437574:2437574243757424388871314Sebaldella termitidis ATCC 33386, complete genomePTS system, lactose/cellobiose family IIC subunit3e-31136
NC_006085:1234587:1246988124698812482561269Propionibacterium acnes KPA171202, complete genomePTS system, cellobiose-specific IIC component7e-29128
NC_010674:2185704:2191232219123221924821251Clostridium botulinum B str. Eklund 17B, complete genomePTS system, lactose/cellobiose family IIC component7e-28125
NC_014039:1238500:1249027124902712502951269Propionibacterium acnes SK137 chromosome, complete genomeputative PTS system, cellobiose-specific IIC component6e-28125
NC_016511:1212282:1222671122267112239481278Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeputative PTS system, cellobiose-specific IIC component6e-28125
NC_016512:1211653:1222042122204212233191278Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeputative PTS system, cellobiose-specific IIC component6e-28125
NC_014377:1985714:1995937199593719972531317Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit1e-27124
NC_016516:1203000:1213488121348812147651278Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeputative PTS system, cellobiose-specific IIC component2e-27123
NC_012925:191501:1972781972781986061329Streptococcus suis P1/7, complete genomesugar phosphotransferase system (PTS), IIC component3e-27123
NC_015391:448833:4488334488334501701338Carnobacterium sp. 17-4 chromosome, complete genomeputative phosphotransferase system enzyme IIC permease component5e-26119
NC_014377:321949:3375153375153387651251Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit7e-26118
NC_013203:1406158:1406158140615814074441287Atopobium parvulum DSM 20469, complete genomePTS system, lactose/cellobiose family IIC subunit2e-23110
NC_014219:192555:1947561947561960631308Bacillus selenitireducens MLS10 chromosome, complete genomePTS system, cellobiose-specific IIC subunit1e-20101
NC_016023:729843:7405837405837419381356Bacillus coagulans 36D1 chromosome, complete genomePTS system lactose/cellobiose family transporter subunit IIC2e-20100
NC_008525:270310:2716672716672729771311Pediococcus pentosaceus ATCC 25745, complete genomecellobiose-specific PTS system IIC component4e-2099.8
NC_014650:1410790:1417528141752814188831356Geobacillus sp. Y4.1MC1 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit1e-1997.8
NC_008800:4488112:4491474449147444927991326Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phosphotransferase protein1e-1997.4
NC_015634:526889:5322735322735336281356Bacillus coagulans 2-6 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit3e-1996.7
NC_008528:331260:3337743337743350751302Oenococcus oeni PSU-1, complete genomecellobiose-specific PTS system IIC component4e-1996.3
NC_003212:2837366:2847990284799028492971308Listeria innocua Clip11262, complete genomehypothetical protein4e-1996.3
NC_012984:2681548:2701047270104727024051359Lactobacillus plantarum JDM1, complete genomecellobiose PTS, EIIC4e-1996.3
NC_013891:2643085:2653623265362326549301308Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIC component4e-1995.9
NC_004668:3156247:3162003316200331633101308Enterococcus faecalis V583, complete genomePTS system, IIC component7e-1995.5
NC_011660:2839201:2848958284895828502651308Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIC7e-1995.1
NC_012488:2719955:2729315272931527306221308Listeria monocytogenes Clip81459, complete genomecellobiose phosphotransferase enzyme IIC component1e-1894.7
NC_002973:2701983:2711343271134327126501308Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIC component1e-1894.7
NC_003210:2749538:2758046275804627593531308Listeria monocytogenes EGD-e, complete genomehypothetical protein1e-1894.4
NC_013766:171889:1825431825431838501308Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-1894.4
NC_013768:171889:1825431825431838501308Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-1894.4
NC_020181:1344259:1344259134425913455811323Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIC component3e-1893.6
NC_012912:844339:8473148473148486601347Dickeya zeae Ech1591, complete genomePTS system, lactose/cellobiose family IIC subunit3e-1893.2
NC_019978:2532640:2550786255078625521081323Halobacteroides halobius DSM 5150, complete genomePTS system, lactose/cellobiose family IIC component3e-1789.7
NC_018607:2578433:2578433257843325797791347Brachyspira pilosicoli B2904 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIC8e-1788.6
NC_018604:233769:2510962510962524421347Brachyspira pilosicoli WesB complete genomePTS system, cellobiose-specific IIC subunit1e-1688.2
NC_008262:2824503:2835774283577428371261353Clostridium perfringens SM101, complete genomecellobiose phosphotransferase enzyme IIC component-like protein lin28321e-1584.7
NC_016612:361417:3636943636943650311338Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system lactose/cellobiose family transporter subunit IIC5e-1582.4
NC_010582:1771591:1771591177159117729461356Streptococcus pneumoniae CGSP14, complete genomephosphotransferase system (PTS) cellobiose-specific, IIC component, putative2e-1480.5
NC_009778:1956225:1957712195771219590311320Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-1479
NC_020260:1993344:1994687199468719960061320Cronobacter sakazakii Sp291, complete genomePTS system transporter subunit EIIC8e-1478.6
NC_020260:263528:2635282635282648531326Cronobacter sakazakii Sp291, complete genomePTS family enzyme IIC component8e-1478.6
NC_013282:2026083:2071278207127820725971320Cronobacter turicensis, complete genomehypothetical protein1e-1378.2
NC_013282:3719500:3736795373679537381531359Cronobacter turicensis, complete genomehypothetical protein1e-1378.2
NC_013716:4306695:4345564434556443468951332Citrobacter rodentium ICC168, complete genomeputative PTS system protein, component EIIc1e-1377.8
NC_010582:1771591:1774521177452117757831263Streptococcus pneumoniae CGSP14, complete genomephosphotransferase system cellobiose-specific component IIC2e-1377.4
NC_019908:323375:3439953439953454221428Brachyspira pilosicoli P43/6/78 chromosome, complete genomePTS system diacetylchitobiose-specific transporter subunit EIIC3e-1377
NC_018604:1137797:1157144115714411585711428Brachyspira pilosicoli WesB complete genomePTS system diacetylchitobiose-specific transporter subunit EIIC3e-1377
NC_018607:1648607:1648607164860716500341428Brachyspira pilosicoli B2904 chromosome, complete genomePTS system diacetylchitobiose-specific transporter subunit EIIC2e-1377
NC_009778:259241:2592412592412605451305Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1376.3
NC_018604:233769:2525392525392538641326Brachyspira pilosicoli WesB complete genomePTS system, cellobiose-specific IIC subunit2e-1170.5
NC_015389:616430:6204066204066217551350Coriobacterium glomerans PW2 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit4e-1169.7
NC_017190:1196356:1225073122507312267791707Bacillus amyloliquefaciens LL3 chromosome, complete genomePTS system, lactose-specific IIB component2e-1067
NC_020181:1344259:1346077134607713473481272Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIC component2e-1067
NC_014330:1541874:1558233155823315595731341Brachyspira pilosicoli 95/1000 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIC2e-1067
NC_011134:1854868:1875720187572018770241305Streptococcus equi subsp. zooepidemicus str. MGCS10565, completecellobiose permease IIC component CelC2e-1067
NC_017191:2174741:2174741217474121764471707Bacillus amyloliquefaciens XH7 chromosome, complete genomePTS system lichenan-specific transporter subunit IIA4e-1066.2
NC_017188:2172706:2172706217270621744121707Bacillus amyloliquefaciens TA208 chromosome, complete genomeLacE4e-1066.2
NC_008563:1651270:1661736166173616630581323Escherichia coli APEC O1, complete genomehypothetical protein4e-1066.2
NC_010498:1615980:1624014162401416253361323Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose family IIC subunit5e-1065.9
NC_011415:1715644:1724635172463517259571323Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIC component8e-1065.5
CP002185:1727493:1736484173648417378061323Escherichia coli W, complete genomePTS system cellobiose-specific IIC component6e-1065.5
CP002516:2361628:2368049236804923693711323Escherichia coli KO11, complete genomePTS system, lactose/cellobiose family IIC subunit6e-1065.5
NC_016902:2361628:2368049236804923693711323Escherichia coli KO11FL chromosome, complete genomePTS system lactose/cellobiose family transporter subunit IIC6e-1065.5
NC_011741:1625535:1634526163452616358871362Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system IIC component9e-1065.1
CU928160:1625535:1634526163452616358871362Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system IIC component9e-1065.1
NC_008800:4488112:4489690448969044909641275Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative cellobiose-specific phosphotransferase1e-0964.7
NC_014551:1279229:1307934130793413096401707Bacillus amyloliquefaciens DSM 7, complete genomeLacE2e-0964.3
NC_015389:1070500:1090190109019010915151326Coriobacterium glomerans PW2 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit2e-0964.3
NC_016584:4363382:4364751436475143668952145Desulfosporosinus orientis DSM 765 chromosome, complete genomePTS system lactose/cellobiose family transporter subunit IIC2e-0963.9
NC_018604:233769:2538982538982552381341Brachyspira pilosicoli WesB complete genomePTS system, cellobiose-specific IIC subunit3e-0963.2
NC_020410:1123121:1152617115261711543141698Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePTS system lactose-specific EIICB component [Includes: Lactose permease IIC component ; Lactose-specific phosphotransferase enzyme IIB component]6e-0962.4
NC_015389:1977736:1984887198488719862721386Coriobacterium glomerans PW2 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit8e-0962
NC_020291:5409587:5424911542491154262751365Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomePTS system, lactose/cellobiose family IIC component1e-0861.6
NC_008800:1090000:1090408109040810917691362Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC7e-0858.9
NC_015389:114469:1213591213591226541296Coriobacterium glomerans PW2 chromosome, complete genomePTS system, lactose/cellobiose family IIC subunit1e-0758.2
NC_015224:3587500:3611002361100236123631362Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC1e-0758.2
NC_020995:3252500:3256404325640432576961293Enterococcus casseliflavus EC20, complete genomePTS system, lactose/cellobiose family IIC component1e-0758.2
NC_012857:557911:5737025737025758732172Ralstonia pickettii 12D chromosome 2, complete genomePTS system, lactose/cellobiose family IIC subunit5e-0755.8
NC_010678:114000:1299081299081320792172Ralstonia pickettii 12J chromosome 2, complete sequencePTS system, lactose/cellobiose family IIC subunit5e-0755.8
NC_008150:2681327:2693445269344526948061362Yersinia pestis Antiqua, complete genomePTS system, cellobiose-specific IIC component8e-0755.5
NC_010465:1273000:1283220128322012845811362Yersinia pseudotuberculosis YPIII, complete genomePTS system, lactose/cellobiose family IIC subunit8e-0755.5
NC_004088:1387276:1399328139932814006891362Yersinia pestis KIM, complete genomePEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin8e-0755.5
NC_005810:2739878:2751991275199127533521362Yersinia pestis biovar Microtus str. 91001, complete genomeN,N'-diacetylchitobiose-specific PTS system transporter subunit IIC8e-0755.5
NC_008149:1317109:1329227132922713305881362Yersinia pestis Nepal516, complete genomePTS system, cellobiose-specific IIC component8e-0755.5
NC_010159:3779129:3789213378921337905741362Yersinia pestis Angola, complete genomePTS system, cellobiose-specific IIC component8e-0755.5
NC_003143:2992295:3004413300441330057741362Yersinia pestis CO92, complete genomePTS system, cellobiose-specific IIC component8e-0755.5
NC_009381:1783886:1790665179066517920261362Yersinia pestis Pestoides F chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIC8e-0755.5
NC_009708:1284555:1294841129484112962021362Yersinia pseudotuberculosis IP 31758 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIC8e-0755.5
NC_014029:3047506:3059624305962430609851362Yersinia pestis Z176003 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIC8e-0755.5
NC_017154:2999841:3005448300544830068091362Yersinia pestis D106004 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIC8e-0755.5
NC_017160:2976683:2984599298459929859601362Yersinia pestis D182038 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIC8e-0755.5
NC_017168:2751027:2756634275663427579951362Yersinia pestis A1122 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIC8e-0755.5
NC_017265:3063016:3068623306862330699841362Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,PTS system cellobiose-specific transporter subunit IIC8e-0755.5
NC_006155:3456488:3462111346211134634571347Yersinia pseudotuberculosis IP 32953, complete genome7e-0755.5
NC_010634:3368000:3375753337575333771141362Yersinia pseudotuberculosis PB1/+, complete genomePTS system lactose/cellobiose family IIC subunit7e-0755.5
NC_012912:1200000:1207488120748812087891302Dickeya zeae Ech1591, complete genomePTS system, lactose/cellobiose family IIC subunit6e-0652.4