Pre_GI: BLASTP Hits

Some Help

Query: NC_006155:713174:716213 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 716213, End: 716989, Length: 777

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:3596000:360936236093623610141780Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-149528
NC_010465:3958766:397103139710313971807777Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF3282e-149528
NC_010159:809663:822959822959823735777Yersinia pestis Angola, complete genomehypothetical protein2e-149528
NC_003143:483395:488896488896489672777Yersinia pestis CO92, complete genomehypothetical protein2e-149528
NC_009708:3903598:391585439158543916630777Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-149528
NC_014029:536000:542389542389543165777Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-149528
NC_017154:478000:484540484540485316777Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-149528
NC_017160:479411:486732486732487508777Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-149528
NC_017168:601928:614183614183614959777Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-149528
NC_005810:4224500:423536342353634236142780Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-149528
NC_008149:402599:408100408100408879780Yersinia pestis Nepal516, complete genomehypothetical protein1e-149528
NC_008150:4561633:456713445671344567913780Yersinia pestis Antiqua, complete genomehypothetical protein1e-149528
NC_004088:4116676:412892841289284129707780Yersinia pestis KIM, complete genomehypothetical protein1e-149528
NC_017265:3982020:399427539942753995051777Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-149526
NC_016612:2223357:222335722233572224130774Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-116417
NC_008309:502983:522087522087522863777Haemophilus somnus 129PT, complete genomehypothetical protein2e-96351
NC_005085:1269787:131562713156271316400774Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-81301
NC_002927:4130697:413195041319504132723774Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-69261
NC_002929:2589202:259309925930992593872774Bordetella pertussis Tohama I, complete genomehypothetical protein4e-69261
NC_002928:3715492:371674537167453717518774Bordetella parapertussis 12822, complete genomehypothetical protein4e-69261
NC_010723:2231834:225376322537632254536774Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein8e-60230
NC_010674:2435241:245330824533082454081774Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein8e-59227
NC_008610:1068429:109134110913411092075735Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),5e-45181
NC_007109:808331:825901825901826647747Rickettsia felis URRWXCal2, complete genomehypothetical protein1e-44180
NC_019814:678404:700971700971701675705Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein1e-40166
NC_015160:797780:819818819818820585768Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein5e-40164
NC_009953:3552738:355976535597653560622858Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein8e-36150
NC_009380:3346132:334768733476873348478792Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein7e-35147
NC_011830:259121:272435272435273190756Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF3282e-33142
NC_007907:321537:346832346832347587756Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-33142
NC_019815:114288:120085120085120588504Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneihypothetical protein2e-30132
NC_020291:4246500:425984242598424260582741Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein2e-29129
NC_015977:3215770:322410932241093224858750Roseburia hominis A2-183 chromosome, complete genomehypothetical protein7e-29127
NC_010001:1917456:192894619289461929713768Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF3287e-29127
NC_003454:249304:255348255348256094747Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeProtein yaaA1e-25117
NC_013853:1538748:155371515537151554443729Streptococcus mitis B6, complete genomehypothetical protein2e-1376.3
NC_003098:1372875:138967113896711390399729Streptococcus pneumoniae R6, complete genomehypothetical protein9e-1373.9
NC_012469:1403412:141817314181731418901729Streptococcus pneumoniae Taiwan19F-14, complete genomehypothetical protein9e-1373.9
NC_008533:1380406:139720213972021397930729Streptococcus pneumoniae D39, complete genomehypothetical protein9e-1373.9
NC_012468:1453763:146886014688601469588729Streptococcus pneumoniae 70585, complete genomehypothetical protein1e-1273.9
NC_012466:1367099:138255713825571383285729Streptococcus pneumoniae JJA, complete genomehypothetical protein2e-1272.8
NC_011900:1451545:146969914696991470427729Streptococcus pneumoniae ATCC 700669, complete genomehypothetical protein2e-1272.8
NC_012881:964823:970841970841971503663Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF3285e-0961.6
NC_014643:1986440:198644019864401987225786Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein1e-0653.9
NC_015953:1983821:199505319950531995853801Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein3e-0652.4