Pre_GI: BLASTP Hits

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Query: NC_006155:652500:652739 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 652739, End: 653752, Length: 1014

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:635362:635362635362636357996Yersinia pseudotuberculosis PB1/+, complete genomeDeoR family transcriptional regulator2e-177621
NC_012962:1661683:1661683166168316626901008Photorhabdus asymbiotica, complete genomeputative transcriptional regulator, sorc family (putative sorc-typ transcriptional regulator)7e-141500
NC_011740:1595381:159716515971651598118954Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator3e-111401
NC_015519:686027:687874687874688818945Tepidanaerobacter sp. Re1 chromosome, complete genomeDeoR family transcriptional regulator4e-36152
NC_014377:1400544:140441214044121405368957Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, DeoR family2e-34146
NC_013517:3997448:400404740040474005012966Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, DeoR family7e-29128
NC_002570:832480:844531844531845481951Bacillus halodurans C-125, complete genometranscriptional regulator6e-26118
NC_009952:526456:537246537246538217972Dinoroseobacter shibae DFL 12, complete genometranscriptional regulator3e-24112
NC_012658:3744000:375002637500263750997972Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative glucitol operon regulator7e-24111
NC_010520:3753875:375967837596783760649972Clostridium botulinum A3 str. Loch Maree, complete genomeputative glucitol operon regulator6e-24111
NC_010516:3724312:373016437301643731135972Clostridium botulinum B1 str. Okra, complete genomeputative glucitol operon regulator1e-23110
NC_012563:3921859:392701539270153927986972Clostridium botulinum A2 str. Kyoto, complete genomeputative glucitol operon regulator1e-23110
NC_015588:1847500:186918818691881870168981Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, DeoR family1e-23110
NC_009699:3753599:376194337619433762914972Clostridium botulinum F str. Langeland chromosome, complete genomeglucitol operon regulator1e-23110
NC_017297:3752000:376055637605563761527972Clostridium botulinum F str. 230613 chromosome, complete genomeputative glucitol operon regulator1e-23110
NC_009697:3629250:363510136351013636072972Clostridium botulinum A str. ATCC 19397 chromosome, completeglucitol operon regulator1e-23110
NC_009698:3526359:353221035322103533181972Clostridium botulinum A str. Hall chromosome, complete genomeglucitol operon regulator1e-23110
NC_006270:4048876:406533340653334066271939Bacillus licheniformis ATCC 14580, complete genometranscriptional regulator4e-23108
NC_006322:4048990:406544740654474066385939Bacillus licheniformis ATCC 14580, complete genomeDeoR4e-23108
NC_006370:768745:787608787608788588981Photobacterium profundum SS9 chromosome 1, complete sequenceputative transcriptional regulator, SorC family2e-22107
NC_006085:925604:955443955443956387945Propionibacterium acnes KPA171202, complete genometranscriptional regulator, SorC family2e-22106
NC_009655:195500:208793208793209746954Actinobacillus succinogenes 130Z chromosome, complete genomeDeoR family transcriptional regulator3e-22106
NC_003047:3202125:320716032071603208107948Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN4e-22105
NC_012032:1827244:184394718439471844870924Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, DeoR family6e-22105
NC_010175:1825878:184258118425811843504924Chloroflexus aurantiacus J-10-fl, complete genomeputative sugar-binding domain protein6e-22105
NC_013501:777947:786311786311787264954Rhodothermus marinus DSM 4252, complete genometranscriptional regulator, DeoR family6e-21102
NC_021064:1789980:179671917967191797663945Propionibacterium avidum 44067, complete genometranscriptional regulator deoR family protein8e-21101
NC_013517:3948500:396115939611593962091933Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, DeoR family1e-20100
NC_014532:1713987:172278317227831723733951Halomonas elongata DSM 2581, complete genometranscriptional regulator, DeoR family7e-2098.2
NC_015519:426948:468217468217469179963Tepidanaerobacter sp. Re1 chromosome, complete genomeDeoR family transcriptional regulator1e-1997.4
NC_014364:3707311:371045937104593711397939Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, DeoR family8e-1994.7
NC_014624:551510:564192564192565154963Eubacterium limosum KIST612 chromosome, complete genomeDeoR family transcriptional regulator5e-1892
NC_013199:392450:409023409023409970948Lactobacillus rhamnosus Lc 705, complete genometranscriptional regulator, SorR, sorbitol operon regulator5e-1892
NC_016816:2782373:280522428052242806171948Pantoea ananatis LMG 5342, complete genomedeoxyribonucleoside regulator DeoR7e-1891.7
NC_014923:1680095:170472417047241705704981Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar-binding domain-containing protein8e-1891.3
NC_015519:270637:290221290221291177957Tepidanaerobacter sp. Re1 chromosome, complete genomeDeoR family transcriptional regulator2e-1790.1
NC_015137:2616222:264137426413742642321948Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDeoR family transcriptional regulator4e-1789.4
NC_012704:1641684:165346716534671654402936Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, DeoR family2e-1583.2
NC_019973:1731626:175707817570781757983906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator with sigma factor-related N-terminal domain5e-1582
NC_014532:3479674:349149834914983492457960Halomonas elongata DSM 2581, complete genomeK05346 deoxyribonucleoside regulator6e-1581.6
NC_016605:233087:245383245383246333951Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeputative sugar-binding domain protein8e-1478.2
NC_015675:1721543:174709817470981748003906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeDeoR family transcriptional regulator1e-1273.9
NC_014330:952500:965033965033965965933Brachyspira pilosicoli 95/1000 chromosome, complete genomeDeoR family transcriptional regulator5e-1272.4
NC_019908:2247956:225140022514002252332933Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDeoR family transcriptional regulator3e-1169.7
NC_015389:616430:671911671911672867957Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, DeoR family1e-1067.4
NC_015519:2045935:2059066205906620601181053Tepidanaerobacter sp. Re1 chromosome, complete genomeDeoR family transcriptional regulator2e-1067
NC_015425:604842:6064226064226074831062Clostridium botulinum BKT015925 chromosome, complete genometranscriptional regulator2e-0963.9
NC_009674:3732000:3743224374322437442521029Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDeoR family transcriptional regulator8e-0858.2
NC_010718:2116889:2129349212934921303771029Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, DeoR family1e-0757.8
NC_004722:5027762:5043707504370750447501044Bacillus cereus ATCC 14579, complete genomeCentral glycolytic genes regulator2e-0757.4
NC_011772:4994500:5009169500916950101971029Bacillus cereus G9842, complete genomegapA transcriptional regulator CggR1e-0757.4
NC_011725:5043198:5055404505540450564321029Bacillus cereus B4264 chromosome, complete genomegapA transcriptional regulator CggR1e-0757.4
NC_014171:4933200:4945129494512949461571029Bacillus thuringiensis BMB171 chromosome, complete genomecentral glycolytic genes regulator1e-0757.4
NC_017208:5096759:5108978510897851100061029Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecentral glycolytic genes regulator1e-0757.4
NC_007530:4853740:4864505486450548655331029Bacillus anthracis str. 'Ames Ancestor', complete genomegapa transcriptional regulator cggr3e-0756.2
NC_003909:4831000:4840793484079348418211029Bacillus cereus ATCC 10987, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_005957:4850659:4870225487022548712531029Bacillus thuringiensis serovar konkukian str. 97-27, completecentral glycolytic genes regulator3e-0756.2
NC_014335:4800500:4815383481538348164111029Bacillus cereus biovar anthracis str. CI chromosome, completecentral glycolytic genes regulator3e-0756.2
NC_012472:4867210:4879350487935048803781029Bacillus cereus 03BB102, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_003997:4852332:4864379486437948654071029Bacillus anthracis str. Ames, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_006274:4910465:4922747492274749237751029Bacillus cereus E33L, complete genomecentral glycolytic genes regulator3e-0756.2
NC_008600:4868000:4877574487757448786171044Bacillus thuringiensis str. Al Hakam, complete genomecentral glycolytic genes regulator3e-0756.2
NC_005945:4854951:4865716486571648667441029Bacillus anthracis str. Sterne, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_011658:4866184:4878458487845848794861029Bacillus cereus AH187 chromosome, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_010468:1816359:181988518198851820862978Escherichia coli ATCC 8739, complete genometranscriptional regulator, DeoR family3e-0756.2
NC_017200:4915780:4927903492790349289311029Bacillus thuringiensis serovar finitimus YBT-020 chromosome,central glycolytic genes regulator3e-0756.2
NC_016779:4825599:4837725483772548387531029Bacillus cereus F837/76 chromosome, complete genomeCentral glycolytic genes regulator3e-0756.2
NC_016771:4821000:4830781483078148318091029Bacillus cereus NC7401, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_012659:4853640:4864405486440548654331029Bacillus anthracis str. A0248, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_012581:4856620:4866828486682848678561029Bacillus anthracis str. CDC 684 chromosome, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_011969:4802500:4812089481208948131171029Bacillus cereus Q1 chromosome, complete genomecentral glycolytic genes regulator3e-0756.2
NC_011773:4914601:4926873492687349279011029Bacillus cereus AH820 chromosome, complete genomegapA transcriptional regulator CggR3e-0756.2
NC_010184:4879552:4896488489648848975161029Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, DeoR family4e-0755.8
NC_020291:5641444:5652749565274956537981050Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecentral glycolytic genes regulator8e-0755.1
NC_004557:363628:3664713664713674991029Clostridium tetani E88, complete genomeputative central glycolytic genes regulator1e-0654.7
NC_014618:3700640:370858437085843709546963Enterobacter cloacae SCF1 chromosome, complete genomeDeoR family transcriptional regulator3e-0653.1