Pre_GI: BLASTP Hits

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Query: NC_006155:3456488:3467517 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3467517, End: 3467846, Length: 330

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3063016:307404430740443074373330Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-42168
NC_010634:3368000:338117433811743381503330Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-41168
NC_008149:1317109:132483813248381325167330Yersinia pestis Nepal516, complete genomehypothetical protein8e-42168
NC_008150:2681327:268905626890562689385330Yersinia pestis Antiqua, complete genomehypothetical protein8e-42168
NC_003143:2992295:300002430000243000353330Yersinia pestis CO92, complete genomehypothetical protein8e-42168
NC_005810:2739878:274760727476072747936330Yersinia pestis biovar Microtus str. 91001, complete genomeacid-resistance protein8e-42168
NC_004088:1387276:139493913949391395268330Yersinia pestis KIM, complete genomehypothetical protein8e-42168
NC_010159:3779129:378482537848253785154330Yersinia pestis Angola, complete genomehypothetical protein8e-42168
NC_009708:1284555:129045112904511290780330Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeacid-resistance protein8e-42168
NC_014029:3047506:305523530552353055564330Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-42168
NC_017154:2999841:301086930108693011198330Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-42168
NC_017160:2976683:298020929802092980538330Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-42168
NC_017168:2751027:276205527620552762384330Yersinia pestis A1122 chromosome, complete genomeacid-resistance protein8e-42168
NC_010465:1273000:127883412788341279163330Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein4e-41166
NC_009381:1783886:179608617960861796415330Yersinia pestis Pestoides F chromosome, complete genomeacid-resistance protein3e-41166
CP002516:246767:253990253990254328339Escherichia coli KO11, complete genomeacid-resistance protein4e-1683.2
NC_012967:3549880:358545735854573585783327Escherichia coli B str. REL606 chromosome, complete genomeacid-resistance protein5e-1683.2
NC_012759:3529657:354248335424833542809327Escherichia coli BW2952 chromosome, complete genomeacid-resistance protein5e-1683.2
NC_011741:3709081:371995137199513720277327Escherichia coli IAI1 chromosome, complete genomeacid-resistance protein5e-1683.2
NC_011415:3887997:390110839011083901434327Escherichia coli SE11 chromosome, complete genomeacid-resistance protein5e-1683.2
CU928160:3709081:371995137199513720277327Escherichia coli IAI1 chromosome, complete genomeacid-resistance protein5e-1683.2
CU928145:3983432:402107440210744021400327Escherichia coli 55989 chromosome, complete genomeacid-resistance protein5e-1683.2
AC_000091:3976888:398412339841233984449327Escherichia coli W3110 DNA, complete genomeacid-resistance protein5e-1683.2
NC_000913:3624826:365398936539893654315327Escherichia coli K12, complete genomeacid-resistance protein5e-1683.2
NC_010468:231000:238363238363238689327Escherichia coli ATCC 8739, complete genomehypothetical protein5e-1683.2
NC_011748:3983432:402107440210744021400327Escherichia coli 55989, complete genomeacid-resistance protein5e-1683.2
NC_010473:3722571:375173437517343752060327Escherichia coli str. K-12 substr. DH10B, complete genomeacid-resistance protein5e-1683.2
NC_008258:3581583:359328435932843593610327Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-1683.2
NC_009648:3803622:384295838429583843263306Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeacid-resistance protein5e-1683.2
NC_009800:3685651:369727736972773697615339Escherichia coli HS, complete genomeHdeB protein4e-1683.2
NC_004337:3621985:363302336330233633361339Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-1683.2
NC_009801:3956917:396777739677773968115339Escherichia coli E24377A, complete genomeHdeB protein4e-1683.2
NC_017328:3655876:366787936678793668217339Shigella flexneri 2002017 chromosome, complete genomeacid-resistance protein4e-1683.2
NC_016902:246767:253990253990254328339Escherichia coli KO11FL chromosome, complete genomeacid-resistance protein4e-1683.2
NC_016822:3946500:396000439600043960342339Shigella sonnei 53G, complete genomeacid-resistance protein4e-1683.2
NC_013364:4306000:431545543154554315793339Escherichia coli O111:H- str. 11128, complete genomeacid-resistance protein HdeB4e-1683.2
NC_013361:4566779:457673545767354577073339Escherichia coli O26:H11 str. 11368 chromosome, complete genomeacid-resistance protein4e-1683.2
NC_013353:4313462:432317643231764323514339Escherichia coli O103:H2 str. 12009, complete genomeacid-resistance protein HdeB4e-1683.2
NC_012947:248000:255381255381255719339Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeacid-resistance protein4e-1683.2
NC_007613:3470314:350153235015323501870339Shigella boydii Sb227, complete genomehypothetical protein4e-1683.2
NC_010658:3622610:363376936337693634107339Shigella boydii CDC 3083-94, complete genomeHdeB protein4e-1683.2
NC_007384:3741708:374893137489313749269339Shigella sonnei Ss046, complete genomehypothetical protein4e-1683.2
NC_004741:4132056:414048741404874140825339Shigella flexneri 2a str. 2457T, complete genomehypothetical protein4e-1683.2
AP010958:4313462:432317643231764323514339Escherichia coli O103:H2 str. 12009 DNA, complete genomeacid-resistance protein HdeB4e-1683.2
CP002185:3822470:385174538517453852083339Escherichia coli W, complete genomeacid-resistance protein4e-1683.2
NC_004337:3590323:363302336330233633361339Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-1683.2
NC_012779:2856051:288605528860552886387333Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1375.1
NC_009648:3803622:383683438368343837124291Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-1062.4