Pre_GI: BLASTP Hits

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Query: NC_006155:3456488:3465723 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3465723, End: 3466898, Length: 1176

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:1284555:1291399129139912925741176Yersinia pseudotuberculosis IP 31758 chromosome, complete genomevoltage-gated potassium channel0766
NC_010634:3368000:3379380337938033805551176Yersinia pseudotuberculosis PB1/+, complete genomeTrkA domain-containing protein0766
NC_010465:1273000:1279778127977812809531176Yersinia pseudotuberculosis YPIII, complete genomeTrkA-N domain protein0766
NC_008149:1317109:1325785132578513269601176Yersinia pestis Nepal516, complete genomepotassium channel protein0759
NC_004088:1387276:1395886139588613970611176Yersinia pestis KIM, complete genomepotassium channel0759
NC_003143:2992295:3000971300097130021461176Yersinia pestis CO92, complete genomeputative potassium channel protein0759
NC_008150:2681327:2690003269000326911781176Yersinia pestis Antiqua, complete genomeputative potassium channel protein0759
NC_005810:2739878:2748549274854927497241176Yersinia pestis biovar Microtus str. 91001, complete genomevoltage-gated potassium channel0759
NC_010159:3779129:3785772378577237869471176Yersinia pestis Angola, complete genomepotassium channel protein Kch0759
NC_009381:1783886:1794293179429317954681176Yersinia pestis Pestoides F chromosome, complete genomevoltage-gated potassium channel0759
NC_014029:3047506:3056182305618230573571176Yersinia pestis Z176003 chromosome, complete genomeputative potassium channel protein0759
NC_017154:2999841:3009076300907630102511176Yersinia pestis D106004 chromosome, complete genomeputative potassium channel protein0759
NC_017160:2976683:2981156298115629823311176Yersinia pestis D182038 chromosome, complete genomeputative potassium channel protein0759
NC_017168:2751027:2760262276026227614371176Yersinia pestis A1122 chromosome, complete genomevoltage-gated potassium channel0759
NC_017265:3063016:3072251307225130734261176Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative potassium channel protein0759
NC_009801:1392696:1397878139787813991311254Escherichia coli E24377A, complete genomepotassium channel protein kch7e-57221
NC_007384:2007467:2026020202602020272731254Shigella sonnei Ss046, complete genomeputative potassium channel protein7e-57221
NC_013364:1596278:1602395160239516036481254Escherichia coli O111:H- str. 11128, complete genomevoltage-gated potassium channel protein Kch7e-57221
NC_007606:1209132:1213393121339312146461254Shigella dysenteriae Sd197, complete genomeputative potassium channel protein2e-56219
NC_009484:429269:4487494487494499991251Acidiphilium cryptum JF-5 chromosome, complete genomevoltage-gated potassium channel9e-55214
NC_010473:1384000:139698613969861397689704Escherichia coli str. K-12 substr. DH10B, complete genome3e-25116
NC_002689:78297:1008111008111018391029Thermoplasma volcanium GSS1, complete genomeKef-type K+ transport system, predicted NAD-binding component5e-1582.4
NC_011296:801612:8023268023268033481023Thermodesulfovibrio yellowstonii DSM 11347, complete genomepotassium uptake protein, TrkA family1e-0964.7
NC_013849:1396051:139882413988241399351528Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein3e-0963.2
NC_009662:837500:8607008607008622801581Nitratiruptor sp. SB155-2, complete genomepotassium channel protein4e-0859.7
NC_014122:205112:220070220070221065996Methanocaldococcus infernus ME chromosome, complete genomeTrkA-N domain protein2e-0757.4
NC_015968:2583721:258408225840822584951870Enterobacter asburiae LF7a chromosome, complete genomeIon transport protein3e-0756.6
NC_019978:1477724:1498498149849814995081011Halobacteroides halobius DSM 5150, complete genomeK+ transport system, NAD-binding component6e-0755.8
NC_013967:2103968:210396821039682104810843Haloferax volcanii DS2 chromosome, complete genomeIon channel family4e-0652.8
NC_013791:875224:8952738952738962921020Bacillus pseudofirmus OF4 chromosome, complete genomepotassium channel protein8e-0652
NC_011283:2185462:218652121865212187348828Klebsiella pneumoniae 342 chromosome, complete genometransporter cation channel family8e-0652
NC_013850:2103469:212005921200592120892834Klebsiella variicola At-22 chromosome, complete genomeIon transport protein8e-0652