Pre_GI: BLASTP Hits

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Query: NC_006155:3456488:3463468 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3463468, End: 3463785, Length: 318

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:1284555:129451312945131294830318Yersinia pseudotuberculosis IP 31758 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB1e-47188
NC_010465:1273000:128289212828921283209318Yersinia pseudotuberculosis YPIII, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-47188
NC_010634:3368000:337712533771253377442318Yersinia pseudotuberculosis PB1/+, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-47188
NC_003143:2992295:300408530040853004402318Yersinia pestis CO92, complete genomePTS system, cellobiose-specific IIB component2e-47187
NC_008149:1317109:132889913288991329216318Yersinia pestis Nepal516, complete genomePTS system, cellobiose-specific IIB component2e-47187
NC_009381:1783886:179203717920371792354318Yersinia pestis Pestoides F chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB2e-47187
NC_014029:3047506:305929630592963059613318Yersinia pestis Z176003 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB2e-47187
NC_017154:2999841:300682030068203007137318Yersinia pestis D106004 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB2e-47187
NC_017160:2976683:298427129842712984588318Yersinia pestis D182038 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB2e-47187
NC_017168:2751027:275800627580062758323318Yersinia pestis A1122 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB2e-47187
NC_017265:3063016:306999530699953070312318Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,PTS system cellobiose-specific transporter subunit IIB2e-47187
NC_004088:1387276:139897013989701399317348Yersinia pestis KIM, complete genomePEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin2e-47187
NC_005810:2739878:275163327516332751980348Yersinia pestis biovar Microtus str. 91001, complete genomeN,N'-diacetylchitobiose-specific PTS system transporter subunit IIB2e-47187
NC_008150:2681327:269311726931172693434318Yersinia pestis Antiqua, complete genomePTS system, cellobiose-specific IIB component2e-47187
NC_010159:3779129:378888537888853789202318Yersinia pestis Angola, complete genomePTS system, cellobiose-specific IIB component3e-46183
NC_008800:1090000:109008010900801090397318Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB9e-43171
NC_015224:3587500:361237436123743612691318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB9e-43171
NC_008262:2824503:283714728371472837449303Clostridium perfringens SM101, complete genomePTS system, IIB component9e-1579
NC_014219:192555:196401196401196712312Bacillus selenitireducens MLS10 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit8e-1372.4
NC_013716:4306695:434691043469104347224315Citrobacter rodentium ICC168, complete genomePTS system, cellobiose-specific IIb component2e-1167.4
NC_020260:263528:264870264870265184315Cronobacter sakazakii Sp291, complete genomecellobiose-specific phosphotransferase enzyme IIB component4e-1166.6
NC_013282:3719500:373649737364973736811315Cronobacter turicensis, complete genomeCellobiose-specific phosphotransferase enzyme IIB component4e-1166.6
NC_009778:259241:260583260583260897315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1166.6
NC_020291:5409587:542631754263175426616300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphotransferase system cellobiose-specific component IIB4e-1166.6
NC_015389:114469:122668122668122979312Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1064.3
CP002185:1727493:173792117379211738232312Escherichia coli W, complete genomePTS system, cellobiose family IIB component2e-1064.3
CP002516:2361628:236762323676232367934312Escherichia coli KO11, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1064.3
CU928160:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component2e-1064.3
NC_011415:1715644:172607217260721726383312Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIB component2e-1064.3
NC_011741:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component2e-1064.3
NC_016902:2361628:236762323676232367934312Escherichia coli KO11FL chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB2e-1064.3
NC_010498:1615980:162358916235891623900312Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose family IIB subunit2e-1064.3
NC_008563:1651270:166317316631731663484312Escherichia coli APEC O1, complete genomePTS system, cellobiose-specific IIB component3e-1063.9
NC_020181:1344259:134559613455961345907312Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIB component3e-1063.9
NC_009800:1632585:164205316420531642364312Escherichia coli HS, complete genomePTS system, lactose/cellobiose family IIB component3e-1063.9
NC_013891:2643085:265318026531802653485306Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIB component4e-1063.5
NC_008261:2743942:276488027648802765209330Clostridium perfringens ATCC 13124, complete genomePTS system, lactose/cellobiose-specific IIB component6e-1062.8
NC_003210:2749538:275760627576062757911306Listeria monocytogenes EGD-e, complete genomehypothetical protein7e-1062.8
NC_003212:2837366:284754828475482847853306Listeria innocua Clip11262, complete genomehypothetical protein5e-0960.1
NC_013766:171889:183986183986184291306Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-0960.1
NC_013768:171889:183986183986184291306Listeria monocytogenes 08-5923, complete genomehypothetical protein5e-0960.1
NC_002973:2701983:271090327109032711208306Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIB component5e-0960.1
NC_011660:2839201:285040128504012850706306Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB5e-0960.1
NC_012488:2719955:272887527288752729180306Listeria monocytogenes Clip81459, complete genomecellobiose phosphotransferase enzyme IIB component5e-0960.1
NC_016605:132253:137529137529137843315Pediococcus claussenii ATCC BAA-344 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit4e-0960.1
NC_020995:3252500:325769332576933258004312Enterococcus casseliflavus EC20, complete genomehypothetical protein4e-0960.1
NC_010582:1771591:177329017732901773607318Streptococcus pneumoniae CGSP14, complete genomePTS system, IIB component2e-0857.4
NC_008800:4488112:449114944911494491463315Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,pts system, cellobiose-specific IIB component4e-0857
NC_012912:844339:850144850144850461318Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-0856.6
NC_016845:2781438:278784727878472788170324Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lactose/cellobiose-specific PTS family enzyme IIB component2e-0754.7
NC_012731:2739964:274637427463742746697324Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomelactose/cellobiose-specific PTS family enzyme IIB component2e-0754.7
NC_013203:1406158:140751414075141407828315Atopobium parvulum DSM 20469, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit9e-0752.4
NC_016641:373623:386847386847387170324Paenibacillus terrae HPL-003 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB4e-0650.1