Pre_GI: BLASTP Hits

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Query: NC_006155:3456488:3461581 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3461581, End: 3461928, Length: 348

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3063016:306810930681093068456348Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,PTS system cellobiose-specific transporter subunit IIA1e-59228
NC_005810:2739878:275351927535192753866348Yersinia pestis biovar Microtus str. 91001, complete genomeN,N'-diacetylchitobiose-specific PTS system transporter subunit IIA1e-59228
NC_008149:1317109:133075513307551331102348Yersinia pestis Nepal516, complete genomePTS system, cellobiose-specific IIA component1e-59228
NC_010465:1273000:128474812847481285095348Yersinia pseudotuberculosis YPIII, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit1e-59228
NC_008150:2681327:269497326949732695320348Yersinia pestis Antiqua, complete genomePTS system, cellobiose-specific IIA component1e-59228
NC_010634:3368000:337523933752393375586348Yersinia pseudotuberculosis PB1/+, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit1e-59228
NC_004088:1387276:140085614008561401203348Yersinia pestis KIM, complete genomePEP-dependent phosphotransferase IIA component for cellobiose, arbutin, and salicin1e-59228
NC_003143:2992295:300594130059413006288348Yersinia pestis CO92, complete genomePTS system, cellobiose-specific IIA component1e-59228
NC_017168:2751027:275612027561202756467348Yersinia pestis A1122 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIA1e-59228
NC_017160:2976683:298612729861272986474348Yersinia pestis D182038 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIA1e-59228
NC_017154:2999841:300493430049343005281348Yersinia pestis D106004 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIA1e-59228
NC_014029:3047506:306115230611523061499348Yersinia pestis Z176003 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIA1e-59228
NC_009381:1783886:179015117901511790498348Yersinia pestis Pestoides F chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIA1e-59228
NC_009708:1284555:129636912963691296716348Yersinia pseudotuberculosis IP 31758 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIA4e-59226
NC_015224:3587500:360920236092023609549348Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA8e-51198
NC_008800:1090000:109322210932221093569348Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA2e-50197
NC_008800:4488112:449283044928304493132303Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phosphotransferase protein4e-30129
NC_012912:1200000:121547512154751215792318Dickeya zeae Ech1591, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit2e-24110
NC_013716:4306695:434384643438464344148303Citrobacter rodentium ICC168, complete genomeputative PTS system protein, component IIA2e-22104
NC_016845:2781438:278752327875232787837315Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative lactose/cellobiose-specific PTS family enzyme IIA component1e-21102
NC_012731:2739964:274605027460502746364315Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative lactose/cellobiose-specific PTS family enzyme IIA component1e-21102
NC_012912:844339:846754846754847080327Dickeya zeae Ech1591, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit3e-21100
NC_009800:1632585:164027716402771640588312Escherichia coli HS, complete genomePTS system, lactose/cellobiose-specific family, IIA component2e-2097.4
NC_010498:1615980:162536416253641625675312Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose-specific family IIA subunit2e-2097.4
CP002185:1727493:173614517361451736456312Escherichia coli W, complete genomePTS system cellobiose-specific IIA component3e-2097.1
CP002516:2361628:236939923693992369710312Escherichia coli KO11, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit3e-2097.1
NC_016902:2361628:236939923693992369710312Escherichia coli KO11FL chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit3e-2097.1
CU928160:1625535:163418716341871634501315Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit3e-2097.1
NC_011415:1715644:172429617242961724610315Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIA component3e-2097.1
NC_011741:1625535:163418716341871634501315Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit3e-2097.1
NC_008563:1651270:166139716613971661711315Escherichia coli APEC O1, complete genomePTS system, cellobiose-specific IIA component8e-2095.5
NC_002973:2701983:271268727126872712989303Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIA component3e-1890.5
NC_013891:2643085:265496726549672655269303Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIA component3e-1890.5
NC_003210:2749538:275939027593902759692303Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-1890.5
NC_003212:2837366:284933428493342849636303Listeria innocua Clip11262, complete genomehypothetical protein3e-1890.5
NC_011660:2839201:284861928486192848921303Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIA3e-1890.5
NC_013766:171889:182204182204182506303Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-1890.5
NC_013768:171889:182204182204182506303Listeria monocytogenes 08-5923, complete genomehypothetical protein3e-1890.5
NC_014410:2329838:235151423515142351843330Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,phosphotransferase system PTS lactose/cellobiose-specific IIA subunit8e-1889
NC_012917:3241196:329094732909473291270324Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit8e-1889
NC_016605:132253:137932137932138255324Pediococcus claussenii ATCC BAA-344 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIA subunit2e-1788.2
NC_020291:5409587:542670654267065427008303Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit4e-1786.7
NC_015634:526889:530761530761531093333Bacillus coagulans 2-6 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit1e-1685.1
NC_016023:729843:743119743119743445327Bacillus coagulans 36D1 chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIA9e-1682
NC_014650:1410790:141599914159991416310312Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific subunit IIA7e-1579.3
NC_018607:2375344:239598323959832396303321Brachyspira pilosicoli B2904 chromosome, complete genomePTS system transporter subunit IIA3e-1477
NC_010582:1771591:177295617729561773273318Streptococcus pneumoniae CGSP14, complete genomephosphotransferase system (PTS) cellobiose-specific component IIA, putative6e-1476.3
NC_019908:1467000:148826614882661488562297Brachyspira pilosicoli P43/6/78 chromosome, complete genomePTS system transporter subunit IIA6e-1476.3
NC_014219:192555:196060196060196383324Bacillus selenitireducens MLS10 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit8e-1475.5
NC_020995:3252500:325800132580013258330330Enterococcus casseliflavus EC20, complete genomehypothetical protein5e-1373.2
NC_014039:1238500:125033412503341250657324Propionibacterium acnes SK137 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIA subunit8e-1269.3
NC_016511:1212282:122394512239451224310366Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit6e-1269.3
NC_016512:1211653:122331612233161223681366Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit6e-1269.3
NC_016516:1203000:121476212147621215127366Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit6e-1269.3
NC_019978:2532640:255039025503902550734345Halobacteroides halobius DSM 5150, complete genomephosphotransferase system cellobiose-specific component IIA2e-1167.4
NC_006085:1234587:124829812482981248618321Propionibacterium acnes KPA171202, complete genomePTS cellobiose-specific component IIA2e-1167.4
NC_010674:2185704:218949221894922189794303Clostridium botulinum B str. Eklund 17B, complete genomePTS system, Lactose/Cellobiose specific IIA subunit1e-1065.1
NC_014377:1985714:199560019956001995917318Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit1e-0962
NC_014215:2295500:231665623166562317138483Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein2e-0960.8
NC_014377:321949:338813338813339178366Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit9e-0958.9
NC_017190:1196356:122679112267911227105315Bacillus amyloliquefaciens LL3 chromosome, complete genomePTS system lactose-specific transporter subunit IIA2e-0857.8
NC_014551:1279229:130965213096521309966315Bacillus amyloliquefaciens DSM 7, complete genomeLacF2e-0857.8
NC_014376:6296:127961279613173378Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit9e-0855.5
NC_018265:75658:897058970590028324Melissococcus plutonius DAT561 plasmid 1, complete sequencephosphotransferase system PTS protein1e-0755.5
NC_008262:2824503:283540728354072835724318Clostridium perfringens SM101, complete genomephosphotransferase system enzyme II, ptcA2e-0754.7
NC_016641:373623:386416386416386763348Paenibacillus terrae HPL-003 chromosome, complete genomePTS system transporter subunit IIA1e-0652
NC_016641:2291363:230698523069852307332348Paenibacillus terrae HPL-003 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit4e-0650.1