Pre_GI: BLASTP Hits

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Query: NC_006155:3456488:3460702 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3460702, End: 3461532, Length: 831

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004088:1387276:140124014012401402082843Yersinia pestis KIM, complete genomenegative transcriptional regulator of cel operon5e-155546
NC_003143:2992295:300632530063253007167843Yersinia pestis CO92, complete genomecel operon repressor5e-155546
NC_010465:1273000:128513212851321285974843Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, AraC family5e-155546
NC_010634:3368000:337436033743603375202843Yersinia pseudotuberculosis PB1/+, complete genomeAraC family transcriptional regulator6e-155546
NC_010159:3779129:379113637911363791966831Yersinia pestis Angola, complete genometranscriptional regulator ChbR9e-155545
NC_008149:1317109:133115113311511331981831Yersinia pestis Nepal516, complete genomecel operon repressor9e-155545
NC_008150:2681327:269536926953692696199831Yersinia pestis Antiqua, complete genomecel operon repressor9e-155545
NC_009381:1783886:178927217892721790102831Yersinia pestis Pestoides F chromosome, complete genomeDNA-binding transcriptional regulator ChbR9e-155545
NC_009708:1284555:129676512967651297595831Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDNA-binding transcriptional regulator ChbR9e-155545
NC_014029:3047506:306154830615483062378831Yersinia pestis Z176003 chromosome, complete genomecel operon repressor9e-155545
NC_017154:2999841:300405530040553004885831Yersinia pestis D106004 chromosome, complete genomecel operon repressor9e-155545
NC_017160:2976683:298652329865232987353831Yersinia pestis D182038 chromosome, complete genomecel operon repressor9e-155545
NC_017168:2751027:275524127552412756071831Yersinia pestis A1122 chromosome, complete genomeDNA-binding transcriptional regulator ChbR9e-155545
NC_017265:3063016:306723030672303068060831Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,cel operon repressor9e-155545
NC_005810:2739878:275390327539032754745843Yersinia pestis biovar Microtus str. 91001, complete genomeDNA-binding transcriptional regulator ChbR3e-154544
NC_008800:1090000:109362110936211094451831Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-binding transcriptional regulator ChbR4e-140497
NC_015224:3587500:360832036083203609150831Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DNA-binding transcriptional regulator ChbR1e-139495
NC_020126:1943092:195779819577981958646849Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator1e-0860.8
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0859.7
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0859.7
NC_016935:4367000:440287544028754403759885Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0859.7
NC_014364:4488875:452496345249634525859897Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family6e-0858.2
NC_020134:1328302:132830213283021329168867Clostridium stercorarium subsp. stercorarium DSM 8532, completeAraC family HTH transcriptional regulator1e-0757.4
NC_015563:4206112:422286042228604223852993Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator3e-0756.2
NC_009483:3644677:366996336699633670763801Geobacter uraniireducens Rf4 chromosome, complete genomeresponse regulator receiver protein6e-0755.1
NC_016830:952342:9813109813109823381029Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator1e-0654.3
NC_013406:3672857:3709192370919237107811590Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator8e-0754.3
NC_013889:1740858:1763240176324017642951056Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator, AraC family1e-0653.9
NC_004193:3530000:353223335322333533039807Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-0653.5
NC_015977:2280834:229516122951612296024864Roseburia hominis A2-183 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_015566:1206500:1238715123871512397521038Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_015567:1206727:1238900123890012399371038Serratia sp. AS9 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_015690:2369510:237275123727512373644894Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0652.8
NC_016935:2256000:227323622732362273550315Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0652.8
NC_015690:1726000:174320517432051743519315Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0652.8
NC_016935:2918689:292111229211122922005894Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0652.8
NC_010674:2185704:220173122017312202468738Clostridium botulinum B str. Eklund 17B, complete genomeDNA-bindng response regulator, AraC family3e-0652.8
NC_010995:1648897:1664476166447616654831008Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AraC family6e-0651.6
NC_013406:4323338:433746343374634338056594Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator6e-0651.6
NC_003909:1205605:122746412274641228366903Bacillus cereus ATCC 10987, complete genometranscriptional regulator, AraC family8e-0651.2