Pre_GI: BLASTP Hits

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Query: NC_006155:2084669:2098677 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2098677, End: 2099162, Length: 486

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3771860:378625037862503786693444Azotobacter vinelandii CA6, complete genomePhage P2 GpU protein2e-37154
NC_012560:3771861:378625137862513786694444Azotobacter vinelandii DJ, complete genomePhage P2 GpU protein2e-37154
NC_008390:2018201:203723820372382038116879Burkholderia cepacia AMMD chromosome 1, complete sequencephage P2 GpU family protein2e-0858.5
NC_015381:3457784:347469734746973475452756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein5e-1063.5
NC_015381:3091500:311565431156543116532879Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein7e-1063.2
NC_015381:2109500:211267021126702113425756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein6e-1063.2
NC_012724:1914740:192413919241391924636498Burkholderia glumae BGR1 chromosome 1, complete genomePhage protein U1e-2099
NC_012724:3070386:308492230849223085800879Burkholderia glumae BGR1 chromosome 1, complete genomePhage P2 GpU family protein8e-1062.8
NC_007963:1552761:156822515682251568668444Chromohalobacter salexigens DSM 3043, complete genomephage P2 GpU4e-33140
NC_015856:1182974:118820811882081188765558Collimonas fungivorans Ter331 chromosome, complete genomephage p2 GpU1e-30131
NC_015563:4959843:496628349662834966741459Delftia sp. Cs1-4 chromosome, complete genomeP2 GpU family protein3e-28124
NC_012881:2310141:232552323255232325903381Desulfovibrio salexigens DSM 2638, complete genomeP2 GpU family protein1e-1685.5
NC_012880:2480000:248836524883652488859495Dickeya dadantii Ech703, complete genomeP2 GpU family protein2e-41167
NC_012779:3016327:302355130235513023979429Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-38157
NC_020181:5130513:516738451673845167869486Enterobacter aerogenes EA1509E, complete genomePhage-related tail protein4e-48190
NC_009436:1466580:148955414895541490039486Enterobacter sp. 638, complete genomephage P2 GpU family protein8e-48189
NC_009801:995396:101492410149241015403480Escherichia coli E24377A, complete genomephage protein gpU2e-49194
NC_011415:2248417:226432222643222264750429Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-1064.3
NC_017033:1089579:109284410928441093686843Frateuria aurantia DSM 6220 chromosome, complete genomephage protein U9e-1682.8
NC_014323:961825:978063978063978590528Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage P2 phage-related tail U protein8e-32135
NC_016845:4077293:408327340832734083599327Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage tail protein2e-30131
NC_009648:3803622:380478838047883805267480Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail protein1e-51201
NC_015276:2023663:203978320397832040175393Marinomonas mediterranea MMB-1 chromosome, complete genomeP2 GpU family protein4e-0753.9
NC_016816:674171:678437678437678940504Pantoea ananatis LMG 5342, complete genomeP2 GpU family protein6e-44176
NC_014837:3739408:375496637549663755451486Pantoea sp. At-9b chromosome, complete genomeP2 GpU family protein1e-50198
NC_008781:3508784:351572135157213516170450Polaromonas naphthalenivorans CJ2, complete genomephage P2 GpU family protein2e-29128
NC_016830:4999946:501770450177045018549846Pseudomonas fluorescens F113 chromosome, complete genomephage protein U4e-0650.8
NC_004129:2234851:223742722374272238272846Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, tail formation protein2e-0755.1
NC_015410:2351464:238451223845122384952441Pseudomonas mendocina NK-01 chromosome, complete genomephage P2 GpU protein1e-36152
NC_017986:4124335:412773441277344128579846Pseudomonas putida ND6 chromosome, complete genomepyocin R2 PP, tail formation protein3e-0754.3
NC_015733:1976752:198025019802501981095846Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, tail formation protein4e-0754.3
NC_004578:3817330:383293838329383833702765Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-0650.8
NC_003198:4453457:447582044758204476305486Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail protein2e-48191
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-50198
NC_020064:871338:882285882285882767483Serratia marcescens FGI94, complete genomephage protein U7e-49192
NC_009832:2211154:223880522388052239263459Serratia proteamaculans 568, complete genomeP2 GpU family protein1e-1065.5
NC_007613:1353500:137033413703341370822489Shigella boydii Sb227, complete genomeputative tail protein7e-27119
NC_007712:3163000:318404331840433184507465Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein7e-48189
NC_007712:1997010:201266220126622013126465Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein7e-48189
NC_006576:856014:873361873361874281921Synechococcus elongatus PCC 6301, complete genomehypothetical protein5e-1683.6
NC_007604:743738:746590746590747510921Synechococcus elongatus PCC 7942, complete genomehypothetical protein5e-1683.6
NC_012416:753500:757164757164757580417Wolbachia sp. wRi, complete genometail protein U, putative5e-1476.6
NC_003902:3544743:354808035480803548481402Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related tail protein1e-24112
NC_014228:3022903:302824430282443028708465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-45182
NC_010465:2582080:258500725850072585471465Yersinia pseudotuberculosis YPIII, complete genomeP2 GpU family protein2e-50197