Pre_GI: BLASTP Hits

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Query: NC_006155:172313:183509 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 183509, End: 183880, Length: 372

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:166900:178101178101178472372Yersinia pseudotuberculosis PB1/+, complete genomeputative phage antitermination protein Q1e-68257
NC_015224:2095816:210684221068422107261420Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage antitermination protein3e-31133
NC_008800:2013450:202082920208292021248420Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage antitermination protein7e-30129
NC_015968:3301958:330667533066753307079405Enterobacter asburiae LF7a chromosome, complete genomeantitermination Q family protein1e-27122
NC_009708:2537557:254690925469092547355447Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage antitermination protein Q2e-25114
NC_010658:1933605:195794919579491958329381Shigella boydii CDC 3083-94, complete genomephage antitermination Q type 1 family8e-23105
NC_014838:218000:236913236913237341429Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceantitermination Q family protein3e-2097.1
NC_003197:2327474:233918423391842339552369Salmonella typhimurium LT2, complete genomeputative phage antiterminator4e-1993.6
NC_016810:2325190:233690023369002337268369Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein4e-1993.6
NC_016857:2325190:233690023369002337268369Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage antiterminator4e-1993.6
NC_016863:2324293:233892923389292339297369Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage antiterminator4e-1993.6
NC_010102:683444:706260706260706625366Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1993.6
NC_016856:2379027:239073723907372391102366Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage antiterminator4e-1993.6
NC_016860:2323017:233472723347272335092366Salmonella enterica subsp. enterica serovar Typhimurium strputative phage antiterminator4e-1993.6
NC_013971:335247:341828341828342190363Erwinia amylovora ATCC 49946 chromosome, complete genomephage antitermination protein9e-1992
NC_013961:3413011:342919234291923429554363Erwinia amylovora, complete genomeAntitermination protein Q9e-1992
NC_013892:2005480:200646020064602006879420Xenorhabdus bovienii SS-2004 chromosome, complete genomeDLP12 prophage; antitermination protein Q6e-1889.4
NC_014562:1772842:178064217806421781175534Pantoea vagans C9-1 chromosome, complete genomeAntitermination protein Q9e-1889
NC_017047:1906000:191302719130271913380354Rahnella aquatilis HX2 chromosome, complete genomeantitermination protein from phage origin3e-1787
NC_016612:3803130:382259638225963822940345Klebsiella oxytoca KCTC 1686 chromosome, complete genomeantitermination protein from phage origin4e-1786.7
NC_017060:59500:973869738697733348Rahnella aquatilis HX2 plasmid PRA1, complete sequenceantitermination protein from phage origin9e-1785.5
NC_011283:3379181:341122534112253411569345Klebsiella pneumoniae 342 chromosome, complete genomeantitermination protein Q2e-1580.9
NC_014228:3282500:332272133227213323098378Xenorhabdus nematophila ATCC 19061, complete genomeputative antitermination protein Q1e-1478.6
NC_011745:3245000:325088132508813251273393Escherichia coli ED1a chromosome, complete genomeAntitermination protein Q from prophage1e-1478.6
NC_000913:558920:573179573179573562384Escherichia coli K12, complete genomeDLP12 prophage; predicted antitermination protein7e-1475.9
NC_010473:498252:512511512511512894384Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted antitermination protein7e-1475.9
CU928145:824367:836045836045836428384Escherichia coli 55989 chromosome, complete genomeputative antitermination protein Q homolog; DLP12 prophage7e-1475.9
AC_000091:558920:573179573179573562384Escherichia coli W3110 DNA, complete genomepredicted antitermination protein7e-1475.9
NC_011748:824367:836045836045836428384Escherichia coli 55989, complete genomeputative antitermination protein Q homolog; DLP12 prophage7e-1475.9
NC_012759:461680:475939475939476322384Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative antitermination protein7e-1475.9
NC_013008:2910567:291966629196662920100435Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantitermination protein Q of bacteriophage1e-1375.1
NC_011353:2957962:296479529647952965229435Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein Q1e-1375.1
NC_011415:2153243:215451321545132154896384Escherichia coli SE11 chromosome, complete genomeputative phage antitermination protein2e-1374.3
NC_011751:643976:660844660844661227384Escherichia coli UMN026 chromosome, complete genomeputative antitermination protein Q-like protein; DLP12 prophage2e-1374.3
NC_012947:3231893:323945032394503239833384Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeantitermination Q family protein2e-1374.3
NC_012967:531000:545846545846546229384Escherichia coli B str. REL606 chromosome, complete genomeputative antitermination protein2e-1374.3
NC_013941:699286:713302713302713685384Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage antitermination Q type 1 family2e-1374.3
NC_004431:1401681:141942014194201419818399Escherichia coli CFT073, complete genomeAntitermination protein Q homolog from lambdoid prophage DLP125e-1373.2
NC_008563:1175035:119335711933571193740384Escherichia coli APEC O1, complete genomeantitermination protein Q-like protein5e-1373.2
NC_007946:1239278:125595512559551256353399Escherichia coli UTI89, complete genomelambdoid prophage DLP12 antitermination protein Q-like protein5e-1373.2
NC_011742:1177946:119687911968791197262384Escherichia coli S88 chromosome, complete genomeantitermination protein Q5e-1373.2
NC_002655:1332961:135107213510721351506435Escherichia coli O157:H7 EDL933, complete genomeantitermination protein Q of bacteriophage BP-933W6e-1372.8
NC_013941:3182576:318698331869833187405423Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator2e-1271.2
NC_013361:1558423:157854315785431578977435Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator Q5e-1269.7
NC_016822:3065426:306786630678663068252387Shigella sonnei 53G, complete genomeantitermination protein Q-like protein5e-1269.7
NC_007384:2933625:293656229365622936948387Shigella sonnei Ss046, complete genomeantitermination protein Q-like protein5e-1269.7
NC_011740:2769961:277950927795092779901393Escherichia fergusonii ATCC 35469, complete genomeputative antitermination protein Q homolog; DLP12 prophage7e-1269.3
NC_011751:1405381:142486214248621425254393Escherichia coli UMN026 chromosome, complete genomeputative antitermination protein Q-like protein; DLP12 prophage1e-1168.9
NC_012947:2189533:219279821927982193175378Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeantitermination Q family protein1e-1168.6
NC_009800:1657550:167335316733531673730378Escherichia coli HS, complete genomephage antitermination Q type 1 family1e-1168.6
NC_013364:3312379:333313233331323333566435Escherichia coli O111:H- str. 11128, complete genomeputative late gene regulator Q1e-1168.2
NC_007712:2028500:207390420739042074269366Sodalis glossinidius str. 'morsitans', complete genomephage antitermination protein5e-1063.2
NC_012779:2184927:219629821962982196462165Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-0856.2