Some Help

Query: NC_006155:172313:178801 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 178801, End: 180249, Length: 1449

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:166900:1733931733931748411449Yersinia pseudotuberculosis PB1/+, complete genomeS-type pyocin domain-containing protein0959
NC_020211:2206500:2212561221256122148162256Serratia marcescens WW4, complete genomeputative klebicin D activity protein9e-66251
NC_020211:2206500:221714122171412217695555Serratia marcescens WW4, complete genomeS-type pyocin domain-containing protein3e-47189
NC_003295:3688000:3698062369806236992221161Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN4e-22106
NC_010002:4930865:493565949356594936366708Delftia acidovorans SPH-1, complete genomehypothetical protein3e-21103
NC_016818:3851542:3874857387485738772772421Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-2099
NC_013282:551219:579188579188579625438Cronobacter turicensis, complete genomehypothetical protein5e-1892.8
NC_009656:3127240:3134353313435331365752223Pseudomonas aeruginosa PA7 chromosome, complete genomekiller protein of pyocin S31e-1791.7
NC_002516:4321000:4327697432769743299912295Pseudomonas aeruginosa PAO1, complete genomepyocin protein2e-1480.9
NC_007005:5500196:5513236551323655151671932Pseudomonas syringae pv. syringae B728a, complete genomeS-type Pyocin3e-1480.5
NC_008463:4389721:4403159440315944055342376Pseudomonas aeruginosa UCBPP-PA14, complete genomepyocin killing protein4e-1479.7
NC_008463:1188951:1196245119624511979241680Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative S-type pyocin protein8e-1479
NC_015663:4767443:4777638477763847797162079Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative klebicin D activity protein1e-1275.1
NC_010693:1:3129312950511923Erwinia tasmaniensis plasmid pET46, complete sequencePutative klebicin D activity protein2e-1170.9
NC_011770:4591500:4601764460176446037521989Pseudomonas aeruginosa LESB58, complete genomepyocin S27e-1168.9
NC_002516:1236644:1243594124359412456632070Pseudomonas aeruginosa PAO1, complete genomepyocin S23e-0963.5