Pre_GI: BLASTP Hits

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Query: NC_006155:1074298:1075091 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 1075091, End: 1075720, Length: 630

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3375463:339483933948393395468630Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Na+-translocating NADH-quinone reductase subunit D6e-105379
NC_008149:1002453:100245310024531003082630Yersinia pestis Nepal516, complete genomeNa+-translocating NADH-quinone reductase subunit D6e-105379
NC_010159:3502350:352140935214093522038630Yersinia pestis Angola, complete genomeNADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit6e-105379
NC_010634:1056441:105723410572341057863630Yersinia pseudotuberculosis PB1/+, complete genomeNADH:ubiquinone oxidoreductase, subunit D6e-105379
NC_003143:3583468:360249936024993603128630Yersinia pestis CO92, complete genomeNADH-ubiquinone oxidoreductase6e-105379
NC_004088:1075454:107545410754541076083630Yersinia pestis KIM, complete genomeNADH-ubiquinone oxidoreductase6e-105379
NC_005810:754340:755190755190755819630Yersinia pestis biovar Microtus str. 91001, complete genomeNa(+)-translocating NADH-quinone reductase subunit D6e-105379
NC_008150:3015000:303417730341773034806630Yersinia pestis Antiqua, complete genomeNa+-translocating NADH-quinone reductase subunit D6e-105379
NC_010465:3597000:361522436152243615853630Yersinia pseudotuberculosis YPIII, complete genomeNADH:ubiquinone oxidoreductase, subunit D6e-105379
NC_017168:2158839:215883921588392159468630Yersinia pestis A1122 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit D6e-105379
NC_017160:3560153:357918435791843579813630Yersinia pestis D182038 chromosome, complete genomeNADH-ubiquinone oxidoreductase6e-105379
NC_017154:3576256:359528735952873595916630Yersinia pestis D106004 chromosome, complete genomeNADH-ubiquinone oxidoreductase6e-105379
NC_014029:3633955:365298636529863653615630Yersinia pestis Z176003 chromosome, complete genomeNADH-ubiquinone oxidoreductase6e-105379
NC_009708:3542336:356136735613673561996630Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit D6e-105379
NC_009381:3228500:324676332467633247392630Yersinia pestis Pestoides F chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit D6e-105379
NC_004459:1794540:181948718194871820119633Vibrio vulnificus CMCP6 chromosome I, complete sequenceNADH-ubiquinone oxidoreductase9e-81299
NC_010506:4404377:440898944089894409621633Shewanella woodyi ATCC 51908, complete genomeNADH:ubiquinone oxidoreductase, subunit D2e-78291
NC_013939:1927424:193716119371611937775615Deferribacter desulfuricans SSM1, complete genomeNa(+)-translocating NADH-quinone reductase subunit D1e-69262
NC_015276:2852010:285788528578852858547663Marinomonas mediterranea MMB-1 chromosome, complete genomeNADH:ubiquinone oxidoreductase, subunit D9e-70262
NC_012881:334250:352808352808353425618Desulfovibrio salexigens DSM 2638, complete genomeNADH:ubiquinone oxidoreductase, subunit D2e-63241
NC_015571:1265121:128520012852001285829630Porphyromonas gingivalis TDC60, complete genomeNa(+)-translocating NADH-quinone reductase, subunit D1e-43176
NC_014484:371500:389583389583390185603Spirochaeta thermophila DSM 6192 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit D4e-41167
NC_010376:1175916:119164311916431192257615Finegoldia magna ATCC 29328, complete genomesodium-translocating NADH-quinone reductase subunit D9e-40163
NC_020409:135699:157188157188157865678Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative inner membrane NADH-quinone reductase6e-28124
NC_015424:2836920:285506028550602855821762Aeromonas veronii B565 chromosome, complete genomeNADH:ubiquinone oxidoreductase, Na(+)-translocating subunit D3e-27121
NC_015709:1459838:151284315128431513514672Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeRnfABCDGE type electron transport complex subunit E9e-27120
NC_003454:63500:103833103833104450618Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNADH-ubiquinone oxidoreductase1e-26119
NC_017179:1197763:120731212073121207905594Clostridium difficile BI1, complete genomeelectron transport complex protein2e-26118
NC_013315:1187986:119753511975351198128594Clostridium difficile CD196 chromosome, complete genomeelectron transport complex protein2e-26118
NC_013316:1186156:119515111951511195744594Clostridium difficile R20291, complete genomeelectron transport complex protein2e-26118
NC_009089:1329826:133937513393751339968594Clostridium difficile 630, complete genomeelectron transport complex protein2e-26118
NC_009697:419443:425044425044425646603Clostridium botulinum A str. ATCC 19397 chromosome, completeelectron transport complex protein RsxE4e-25114
NC_011661:1100576:111656711165671117166600Dictyoglomus turgidum DSM 6724, complete genomeelectron transport complex, RnfABCDGE type, E subunit6e-25114
NC_009633:2350892:235374323537432354372630Alkaliphilus metalliredigens QYMF chromosome, complete genomeRnfABCDGE type electron transport complex subunit E7e-25113
NC_014632:11925:238112381124437627Ilyobacter polytropus DSM 2926 chromosome, complete genomeRnfABCDGE type electron transport complex subunit E1e-24113
NC_017095:166896:197081197081197761681Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRnfABCDGE type electron transport complex subunit E1e-24112
NC_008577:2604281:260601526060152606713699Shewanella sp. ANA-3 chromosome 1, complete sequenceelectron transport complex, RnfABCDGE type, E subunit5e-24110
NC_013959:826868:849437849437850117681Sideroxydans lithotrophicus ES-1 chromosome, complete genomeelectron transport complex, RnfABCDGE type, E subunit4e-23108
NC_018607:2032566:204976220497622050409648Brachyspira pilosicoli B2904 chromosome, complete genomeSoxR-reducing system protein RsxE5e-23107
NC_018604:838932:851968851968852615648Brachyspira pilosicoli WesB complete genomeSoxR-reducing system protein RsxE5e-23107
NC_010519:1764261:178153617815361782252717Haemophilus somnus 2336 chromosome, complete genomeelectron transporter subunit RsxE1e-22106
NC_017096:1147441:116730111673011167903603Caldisericum exile AZM16c01, complete genomeputative electron transport complex protein RnfE3e-22105
NC_014150:648868:665695665695666354660Brachyspira murdochii DSM 12563 chromosome, complete genomeelectron transport complex, RnfABCDGE type, E subunit3e-22104
NC_010718:517473:525561525561526181621Natranaerobius thermophilus JW/NM-WN-LF, complete genomeelectron transport complex, RnfABCDGE type, E subunit7e-22103
NC_020291:744329:749645749645750268624Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeelectron transport complex protein RnfE2e-21102
NC_007955:1464000:147149214714921472103612Methanococcoides burtonii DSM 6242, complete genomeelectron transport complex, RnfABCDGE type, E subunit2e-21102
NC_015566:2328771:234439623443962345094699Serratia sp. AS12 chromosome, complete genomeElectron transport complex protein rnfE3e-21101
NC_015567:2328782:234440723444072345105699Serratia sp. AS9 chromosome, complete genomeElectron transport complex protein rnfE3e-21101
NC_016614:686887:690060690060690740681Vibrio sp. EJY3 chromosome 2, complete sequenceelectron transport complex RsxE subunit1e-1996.3
NC_013194:4964000:497863249786324979306675Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeelectron transport complex, RnfABCDGE type, E subunit1e-1893.2
NC_006138:857692:870405870405871025621Desulfotalea psychrophila LSv54, complete genomeNADH-ubiquinone oxidoreductase2e-1789.4
NC_009697:419443:425697425697426275579Clostridium botulinum A str. ATCC 19397 chromosome, completeRnfABCDGE type electron transport complex subunit A4e-1065.1
NC_010718:517473:526291526291526866576Natranaerobius thermophilus JW/NM-WN-LF, complete genomeelectron transport complex, RnfABCDGE type, A subunit4e-1064.7
NC_009633:2350892:235437623543762354966591Alkaliphilus metalliredigens QYMF chromosome, complete genomeRnfABCDGE type electron transport complex subunit A9e-0857
NC_017179:1197763:120792012079201208495576Clostridium difficile BI1, complete genomeelectron transport complex protein2e-0755.8
NC_013315:1187986:119814311981431198718576Clostridium difficile CD196 chromosome, complete genomeelectron transport complex protein2e-0755.8
NC_009089:1329826:133998313399831340558576Clostridium difficile 630, complete genomeelectron transport complex protein2e-0755.8
NC_013316:1186156:119575911957591196334576Clostridium difficile R20291, complete genomeelectron transport complex protein2e-0755.8
NC_014632:11925:244412444125025585Ilyobacter polytropus DSM 2926 chromosome, complete genomeRnfABCDGE type electron transport complex subunit A6e-0754.3
NC_009348:2631759:264796326479632648544582Aeromonas salmonicida subsp. salmonicida A449, complete genomeNa(+)-translocating NADH-quinone reductase subunit E9e-0753.5
NC_014150:648868:665121665121665702582Brachyspira murdochii DSM 12563 chromosome, complete genomeelectron transport complex, RnfABCDGE type, A subunit9e-0753.5
NC_015424:2836920:284930628493062849887582Aeromonas veronii B565 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit E1e-0653.1
NC_018604:838932:852621852621853199579Brachyspira pilosicoli WesB complete genomeNADH:ubiquinone oxidoreductase, RnfA subunit-like protein1e-0653.1
NC_018607:2032566:204917820491782049756579Brachyspira pilosicoli B2904 chromosome, complete genomeNADH:ubiquinone oxidoreductase, RnfA subunit-like protein1e-0653.1
NC_017096:1147441:116671411667141167304591Caldisericum exile AZM16c01, complete genomeelectron transport complex protein RnfA1e-0653.1
NC_016816:2508204:252947225294722530053582Pantoea ananatis LMG 5342, complete genomeRnfABCDGE type electron transport complex subunit A2e-0652.4
NC_014121:2330451:235691523569152357496582Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeelectron transport complex protein RnfA4e-0651.6
NC_017095:166896:197758197758198330573Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRnfABCDGE type electron transport complex subunit A4e-0651.6
NC_008309:1155218:117336311733631173944582Haemophilus somnus 129PT, complete genomeelectron transport complex protein6e-0650.8
NC_015709:1459838:150831215083121508893582Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeRnfABCDGE type electron transport complex subunit A7e-0650.4
NC_010519:1764261:177651217765121777093582Haemophilus somnus 2336 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit E9e-0650.4