Pre_GI: BLASTP Hits

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Query: NC_006142:33268:52970 Rickettsia typhi str. Wilmington, complete genome

Start: 52970, End: 54178, Length: 1209

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. Rickettsia typhi causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017066:33268:5297052970541781209Rickettsia typhi str. TH1527 chromosome, complete genomealanine racemase0822
NC_017062:33268:5293752937541451209Rickettsia typhi str. B9991CWPP chromosome, complete genomealanine racemase0822
NC_007940:1435701:1436569143656914378011233Rickettsia bellii RML369-C, complete genomeAlanine racemase6e-159560
NC_009883:140890:1568051568051580371233Rickettsia bellii OSU 85-389, complete genomealanine racemase6e-159560
NC_010125:2483122:2507879250787925090301152Gluconacetobacter diazotrophicus PAl 5, complete genomeputative alanine racemase, catabolic2e-73276
NC_011365:738321:7611947611947623451152Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomealanine racemase2e-73276
NC_005955:1166521:1189167118916711902851119Bartonella quintana str. Toulouse, complete genomeAlanine racemase1e-67257
NC_008783:1101973:1123120112312011242411122Bartonella bacilliformis KC583, complete genomealanine racemase3e-66252
NC_007912:1173752:1179342117934211805711230Saccharophagus degradans 2-40, complete genomeAlanine racemase3e-60233
NC_018000:1914945:1960891196089119620241134Sinorhizobium fredii USDA 257 chromosome, complete genomealanine racemase, catabolic1e-54214
NC_015593:797675:8174198174198184651047Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeAlanine racemase4e-48192
NC_014831:285759:3036163036163048001185Thermaerobacter marianensis DSM 12885 chromosome, complete genomealanine racemase3e-43176
NC_014377:1897857:1922399192239919235741176Thermosediminibacter oceani DSM 16646 chromosome, complete genomealanine racemase8e-42171
NC_002678:5020000:5030901503090150320941194Mesorhizobium loti MAFF303099, complete genomealanine racemase7e-41168
NC_014328:4387303:4390305439030543914621158Clostridium ljungdahlii ATCC 49587 chromosome, complete genomealanine racemase2e-39163
NC_010718:304440:3246603246603258321173Natranaerobius thermophilus JW/NM-WN-LF, complete genomealanine racemase3e-39162
NC_014328:1286407:1300512130051213016721161Clostridium ljungdahlii ATCC 49587 chromosome, complete genomealanine racemase4e-38159
NC_008570:1094442:1094685109468510957581074Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomealanine racemase7e-38158
NC_020181:3585898:3620681362068136217601080Enterobacter aerogenes EA1509E, complete genomeAlanine racemase ## biosynthetic5e-37155
UCMB5137:1676568:1679435167943516806161182Bacillus atrophaeus UCMB-5137alanine racemase3e-36152
NC_016935:634500:6671536671536683371185Paenibacillus mucilaginosus 3016 chromosome, complete genomealanine racemase2e-35150
NC_005070:1978000:1980851198085119819811131Synechococcus sp. WH 8102, complete genomealanine racemase3e-35149
NC_015690:632565:6646686646686658521185Paenibacillus mucilaginosus KNP414 chromosome, complete genomealanine racemase3e-35149
NC_013517:2909798:2913786291378629148561071Sebaldella termitidis ATCC 33386, complete genomealanine racemase6e-35148
NC_013364:4990365:5005567500556750066461080Escherichia coli O111:H- str. 11128, complete genomealanine racemase1e-34147
NC_010067:3310336:3359763335976333608421080Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-34147
NC_008817:1476473:1511229151122915124281200Prochlorococcus marinus str. MIT 9515, complete genomeputative Alanine racemase2e-34147
NC_016047:1978312:1999381199938120005651185Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completealanine racemase2e-34146
NC_016809:1778000:1795151179515117962331083Haemophilus influenzae 10810, complete genomealanine racemase 1, PLP-binding, biosynthetic3e-34146
NC_014479:1831404:1852844185284418540281185Bacillus subtilis subsp. spizizenii str. W23 chromosome, completealanine racemase4e-34145
NC_017195:1852935:1879130187913018803141185Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completealanine racemase1e-33144
NC_007516:347824:3596933596933608231131Synechococcus sp. CC9605, complete genomealanine racemase1e-33144
NC_015224:4101939:4103190410319041042691080Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,alanine racemase3e-33143
NC_005072:1458799:1469701146970114708881188Prochlorococcus marinus subsp. pastoris str. CCMP1986, completealanine racemase6e-33142
NC_014215:142500:1426141426141437621149Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Alanine racemase9e-33141
NC_019896:2158223:2170524217052421717111188Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeAlanine racemase 21e-32140
NC_014976:17909:2394823948251321185Bacillus subtilis BSn5 chromosome, complete genomealanine racemase1e-32140
NC_014624:3810163:3831587383158738327861200Eubacterium limosum KIST612 chromosome, complete genomealanine racemase1e-32141
NC_014033:164670:1656381656381680162379Prevotella ruminicola 23 chromosome, complete genomealanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase1e-32141
NC_014963:4872883:4872883487288348740761194Terriglobus saanensis SP1PR4 chromosome, complete genomealanine racemase2e-32140
NC_000964:1873398:1897149189714918983331185Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-32140
NC_014150:1523108:1535463153546315365721110Brachyspira murdochii DSM 12563 chromosome, complete genomealanine racemase3e-32139
NC_012673:2023297:2024441202444120255171077Exiguobacterium sp. AT1b, complete genomealanine racemase7e-32138
NC_013421:4006085:4007533400753340086121080Pectobacterium wasabiae WPP163, complete genomealanine racemase2e-31137
NC_020541:1717140:1721111172111117221841074Rhodanobacter sp. 2APBS1, complete genomealanine racemase3e-31136
NC_014171:235558:2404612404612416301170Bacillus thuringiensis BMB171 chromosome, complete genomealanine racemase1e-30134
NC_014212:319815:3313773313773324981122Meiothermus silvanus DSM 9946 chromosome, complete genomealanine racemase1e-30134
NC_009617:3184924:3208741320874132098711131Clostridium beijerinckii NCIMB 8052 chromosome, complete genomealanine racemase6e-30132
NC_012438:159927:1803551803551814251071Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomealanine racemase9e-30131
NC_015311:2626850:2669911266991126723912481Prevotella denticola F0289 chromosome, complete genomealanine racemase3e-29129
NC_014926:295988:2972712972712983441074Thermovibrio ammonificans HB-1 chromosome, complete genomealanine racemase4e-29129
NC_020244:1875834:1903834190383419049161083Bacillus subtilis XF-1, complete genomealanine racemase5e-29129
NC_019896:3491000:3522330352233035234991170Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeAlanine racemase 17e-29128
NC_014632:402500:4151534151534162861134Ilyobacter polytropus DSM 2926 chromosome, complete genomealanine racemase9e-29128
NC_013192:1941002:1946367194636719474641098Leptotrichia buccalis DSM 1135, complete genomealanine racemase1e-28127
NC_014752:617987:6367376367376377951059Neisseria lactamica ST-640, complete genomealanine racemase2e-28127
NC_007577:1517000:1520887152088715220861200Prochlorococcus marinus str. MIT 9312, complete genomealanine racemase2e-27123
NC_010556:2773396:2795487279548727965601074Exiguobacterium sibiricum 255-15, complete genomealanine racemase2e-27124
NC_020211:2985157:2987786298778629888591074Serratia marcescens WW4, complete genomePLP-binding alanine racemase3e-27122
NC_008816:1476209:1480601148060114818001200Prochlorococcus marinus str. AS9601, complete genomeputative Alanine racemase1e-26120
NC_018665:2563375:2585295258529525863681074Exiguobacterium antarcticum B7 chromosome, complete genomeAlanine racemase 22e-26120
NC_009840:1485383:1551126155112615523251200Prochlorococcus marinus str. MIT 9215, complete genomeputative Alanine racemase2e-26120
NC_011567:204772:2077872077872089441158Anoxybacillus flavithermus WK1, complete genomeD-alanine racemase4e-26119
NC_014210:4831858:4837459483745948385891131Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,alanine racemase4e-26119
NC_013174:650986:6676286676286688601233Jonesia denitrificans DSM 20603, complete genomealanine racemase5e-26119
NC_019897:3057000:3058308305830830594861179Thermobacillus composti KWC4 chromosome, complete genomealanine racemase1e-25117
NC_013192:1765981:1784770178477017859421173Leptotrichia buccalis DSM 1135, complete genomealanine racemase1e-25117
NC_015177:1131173:1170834117083411732902457Pedobacter saltans DSM 12145 chromosome, complete genomealanine racemase1e-25117
NC_009091:1423677:1454261145426114554601200Prochlorococcus marinus str. MIT 9301, complete genomeputative Alanine racemase1e-25117
NC_008391:271254:2962612962612973821122Burkholderia cepacia AMMD chromosome 2, complete sequencealanine racemase2e-25116
NC_017294:71494:7908679086802341149Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomealanine racemase1e-24114
NC_009009:540992:5424805424805435891110Streptococcus sanguinis SK36, complete genomeAlanine racemase, putative1e-24114
NC_012121:1578190:1597419159741915985731155Staphylococcus carnosus subsp. carnosus TM300, complete genomealanine racemase6e-24112
NC_010741:745357:7464667464667475991134Treponema pallidum subsp. pallidum SS14, complete genomealanine racemase2e-23110
NC_021508:745388:7464977464977476301134Treponema pallidum subsp. pallidum SS14, complete genomealanine racemase2e-23110
NC_019903:3537545:3557430355743035586081179Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,alanine racemase1e-22107
NC_011027:303000:3047513047513059051155Chlorobaculum parvum NCIB 8327, complete genomealanine racemase5e-21102
NC_002932:1798869:1817496181749618186471152Chlorobium tepidum TLS, complete genomealanine racemase2e-20100
NC_017214:1304774:1323557132355713249871431Bifidobacterium animalis subsp. lactis BB-12 chromosome, completealanine racemase1e-1687.8
NC_017215:669358:6881426881426895721431Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,alanine racemase1e-1687.8
NC_011835:1395716:1414572141457214159301359Bifidobacterium animalis subsp. lactis AD011 chromosome, completealanine racemase2e-1687
NC_012814:669434:6882816882816896481368Bifidobacterium animalis subsp. lactis Bl-04, complete genomealanine racemase2e-1687.4
NC_012815:669436:6882836882836896501368Bifidobacterium animalis subsp. lactis DSM 10140, complete genomealanine racemase2e-1687.4
NC_017216:669296:6881436881436895101368Bifidobacterium animalis subsp. lactis BLC1, complete genomealanine racemase2e-1687.4
NC_017217:669437:6882846882846896511368Bifidobacterium animalis subsp. lactis V9 chromosome, completealanine racemase2e-1687.4
NC_014923:5787493:5802289580228958034341146Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completealanine racemase2e-1584
NC_019973:5716453:5731249573124957323941146Mesorhizobium australicum WSM2073, complete genomealanine racemase2e-1584
NC_015675:6342164:6356960635696063581051146Mesorhizobium opportunistum WSM2075 chromosome, complete genomealanine racemase2e-1584
NC_020181:734477:752554752554753108555Enterobacter aerogenes EA1509E, complete genomeAlanine racemase, catabolic3e-1480.1
NC_017187:750363:7503637503637513851023Arcobacter butzleri ED-1, complete genomealanine racemase1e-0964.3