Pre_GI: BLASTP Hits

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Query: NC_005810:3493607:3496414 Yersinia pestis biovar Microtus str. 91001, complete genome

Start: 3496414, End: 3497517, Length: 1104

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009648:4656187:4658846465884646599461101Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometRNA (uracil-5-)-methyltransferase2e-162572
CU928160:4248621:4251401425140142525011101Escherichia coli IAI1 chromosome, complete genometRNA (uracil-5-)-methyltransferase3e-162571
NC_010473:4256000:4259890425989042609901101Escherichia coli str. K-12 substr. DH10B, complete genometRNA (uracil-5-)-methyltransferase3e-162571
NC_000913:4159090:4160193416019341612931101Escherichia coli K12, complete genometRNA (uracil-5-)-methyltransferase3e-162571
NC_010468:4455201:4468804446880444699041101Escherichia coli ATCC 8739, complete genometRNA (uracil-5-)-methyltransferase3e-162571
NC_006511:4119332:4120386412038641214861101Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtRNA (uracil-5-)-methyltransferase6e-160563
NC_003198:3586000:3603465360346536045651101Salmonella enterica subsp. enterica serovar Typhi str. CT18,tRNA (uracil-5-)-methyltransferase2e-159562
NC_012913:1867276:1868341186834118694381098Aggregatibacter aphrophilus NJ8700, complete genometRNA (uracil-5-)-methyltransferase3e-140498
NC_013416:16493:3385833858349551098Aggregatibacter actinomycetemcomitans D11S-1, complete genometRNA (uracil-5-)-methyltransferase2e-139495
NC_016513:317197:3361693361693372661098Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetRNA uracil-5--methyltransferase5e-138491
NC_015634:652000:6559596559596573531395Bacillus coagulans 2-6 chromosome, complete genomeTrmA family RNA methyltransferase6e-1582
NC_013939:212331:2238992238992250801182Deferribacter desulfuricans SSM1, complete genometRNA (uracil-5-)-methyltransferase6e-1582
NC_018867:1407163:1447807144780714492071401Dehalobacter sp. CF chromosome, complete genomeRNA methyltransferase, TrmA family3e-1479.7
NC_000117:845141:8615028615028626921191Chlamydia trachomatis D/UW-3/CX, complete genomerRNA Methyltransferse4e-1479.3
NC_016023:579000:5956125956125970181407Bacillus coagulans 36D1 chromosome, complete genomeTrmA family RNA methyltransferase4e-1479.3
NC_015424:748785:7487857487857501071323Aeromonas veronii B565 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase rumA4e-1479.3
NC_018866:1402259:1416403141640314177611359Dehalobacter sp. DCA chromosome, complete genomeRNA methyltransferase, TrmA family8e-1478.2
NC_015865:3657:5472654726559851260Thermococcus sp. 4557 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase1e-1377.8
NC_014934:2985273:3011291301129130127091419Cellulophaga algicola DSM 14237 chromosome, complete genome23S rRNA m(5)u-1939 methyltransferase1e-1377.8
NC_014377:1512217:1530476153047615318281353Thermosediminibacter oceani DSM 16646 chromosome, complete genome23S rRNA m(5)U-1939 methyltransferase1e-1377.8
NC_015975:558523:5591505591505605231374Lactobacillus ruminis ATCC 27782 chromosome, complete genometRNA (Uracil-5-) -methyltransferase2e-1377.4
NC_014206:411143:4259454259454273331389Geobacillus sp. C56-T3 chromosome, complete genomeTrmA family RNA methyltransferase3e-1376.6
NC_014011:813645:8360938360938374871395Aminobacterium colombiense DSM 12261 chromosome, complete genomeRNA methyltransferase, TrmA family1e-1274.7
NC_019970:743497:7529077529077542651359Thermoanaerobacterium thermosaccharolyticum M0795, complete genome23S rRNA (uracil-5-)-methyltransferase RumA1e-1274.3
NC_015496:2371163:2393667239366723950791413Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA methyltransferase, TrmA family1e-1274.3
NC_009328:293000:3598073598073611981392Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSAM-dependent methyltransferase1e-1274.3
NC_009089:3935500:3967487396748739688511365Clostridium difficile 630, complete genomeputative RNA methyltransferase2e-1273.6
NC_003413:1107965:1120410112041011216451236Pyrococcus furiosus DSM 3638, complete genomeRNA methyltransferase3e-1273.2
NC_016641:2587000:2588243258824325899191677Paenibacillus terrae HPL-003 chromosome, complete genomeRNA methyltransferase, trma family protein5e-1272.4
NC_013522:991649:1008531100853110099041374Thermanaerovibrio acidaminovorans DSM 6589, complete genomeRNA methyltransferase, TrmA family5e-1272.4
NC_017519:672462:6840666840666851571092Mycoplasma hyorhinis MCLD chromosome, complete genomeRNA methyltransferase6e-1272
NC_016829:624971:6276236276236287141092Mycoplasma hyorhinis GDL-1 chromosome, complete genomeRNA methyltransferase protein6e-1272
NC_018870:2316499:2373810237381023751651356Thermacetogenium phaeum DSM 12270 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA7e-1272
NC_015913:1248000:1269358126935812706981341Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeRNA (Uracil-5-)-methyltransferase8e-1271.6
NC_016627:4323370:4371357437135743727271371Clostridium clariflavum DSM 19732 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA8e-1271.6
NC_016051:1129154:1148400114840011496561257Thermococcus sp. AM4 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase2e-1170.9
NC_010336:213148:2384052384052397541350Francisella philomiragia subsp. philomiragia ATCC 25017, completeRNA methyltransferase, TrmA family3e-1170.1
NC_016826:929259:9506789506789520391362Streptococcus infantarius subsp. infantarius CJ18 chromosome,RNA methyltransferase3e-1169.7
NC_013198:1030970:1035104103510410364711368Lactobacillus rhamnosus GG, complete genometRNA (uracil-5-)-methyltransferase related enzyme, TrmA family protein3e-1169.7
NC_000964:732255:7369427369427383211380Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-1169.3
NC_011529:1375920:1386364138636413876231260Thermococcus onnurineus NA1, complete genome23S rRNA (uracil-5-)-methyltransferase4e-1169.3
NC_012793:383612:3878343878343892131380Geobacillus sp. WCH70, complete genomeRNA methyltransferase, TrmA family4e-1169.7
NC_008530:1454118:1485212148521214865641353Lactobacillus gasseri ATCC 33323, complete genometRNA (uracil-5-)-methyltransferase related enzyme8e-1168.2
NC_015696:1749863:1757603175760317589521350Francisella sp. TX077308 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase)9e-1168.2
NC_019897:700332:7023347023347037311398Thermobacillus composti KWC4 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA9e-1168.2
NC_006322:741516:7477857477857491731389Bacillus licheniformis ATCC 14580, complete genomeYefA1e-1067.8
NC_006270:741731:7480017480017493891389Bacillus licheniformis ATCC 14580, complete genomeputative RNA methyltransferase YefA1e-1067.8
NC_016593:416661:4193194193194206921374Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeputative RNA methyltransferase1e-1067.8
NC_012891:1277966:1299629129962913009901362Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-1067.4
NC_008601:631504:6469726469726483211350Francisella tularensis subsp. novicida U112, complete genomeRNA methyltransferase, trmA family2e-1066.6
NC_012491:743883:7489607489607504171458Brevibacillus brevis NBRC 100599, complete genomeprobable 23S rRNA (uracil-5-)-methyltransferase2e-1066.6
NC_014206:411143:4143634143634157361374Geobacillus sp. C56-T3 chromosome, complete genomeTrmA family RNA methyltransferase2e-1067
NC_012471:719000:7206387206387222691632Streptococcus equi subsp. equi 4047, complete genomeRNA methyltransferase2e-1067
NC_006510:372826:3754843754843768571374Geobacillus kaustophilus HTA426, complete genomeRNA methyltransferase2e-1067.4
NC_013928:370893:3854673854673868461380Streptococcus mutans NN2025, complete genomeRNA methyltransferase2e-1067.4
NC_013504:1388480:1410658141065814120071350Lactobacillus johnsonii FI9785 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA22e-1067.4
NC_009848:720510:7258677258677272641398Bacillus pumilus SAFR-032, complete genomeTrmA family RNA methyltransferase2e-1067.4
NC_009328:293000:3385933385933399751383Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeRNA methyltransferase-like protein3e-1066.2
NC_020272:3245834:3259520325952032609051386Bacillus amyloliquefaciens IT-45, complete genomeTrmA family RNA methyltransferase3e-1066.6
NC_003228:2973266:2994453299445329958711419Bacteroides fragilis NCTC 9343, complete genomeputative RNA methyltransferase3e-1066.6
NC_006347:2899653:2920839292083929222571419Bacteroides fragilis YCH46, complete genomeRNA methyltransferase3e-1066.6
NC_016933:783938:7990107990108003591350Francisella tularensis TIGB03 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA3e-1066.6
NC_016937:707279:7231037231037244521350Francisella tularensis subsp. tularensis TI0902 chromosome,23S rRNA (uracil-5-)-methyltransferase RumA3e-1066.6
NC_008245:707984:7230567230567244051350Francisella tularensis subsp. tularensis FSC 198, complete genome23S rRNA (Uracil-5-)-methyltransferase3e-1066.6
NC_007880:1456705:1461047146104714623961350Francisella tularensis subsp. holarctica, complete genome23S rRNA (Uracil-5-)-methyltransferase3e-1066.6
NC_006570:707280:7231047231047244531350Francisella tularensis subsp. tularensis Schu 4, complete genome23S rRNA (Uracil-5-)-methyltransferase3e-1066.6
NC_006086:1329915:1329915132991513312701356Streptococcus pyogenes MGAS10394, complete genometRNA (Uracil-5-) -methyltransferase4e-1065.9
UCMB5137:409500:4134124134124148121401Bacillus atrophaeus UCMB-5137putative RNA methyltransferase4e-1065.9
UCMB5137:276121:2804262804262818051380Bacillus atrophaeus UCMB-513723S rRNA (uracil-5-)-methyltransferase RumA4e-1066.2
NC_013799:1:2259122591238531263Hydrogenobacter thermophilus TK-6, complete genomeRNA methyltransferase4e-1066.2
NC_017161:1:2265222652239141263Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTrmA family RNA methyltransferase4e-1066.2
NC_019896:3311000:3327700332770033290791380Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA methyltransferase YefA4e-1066.2
NC_011979:3045952:3054380305438030556931314Geobacter sp. FRC-32, complete genomeRNA methyltransferase, TrmA family5e-1065.9
NC_015311:2689118:2692503269250326939391437Prevotella denticola F0289 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA5e-1065.5
NC_007296:1073784:1091826109182610934931668Streptococcus pyogenes MGAS6180, complete genometRNA (uracil-5-)-methyltransferase6e-1065.5
NC_021184:3571014:3590632359063235919991368Desulfotomaculum gibsoniae DSM 7213, complete genome23S rRNA (uracil-5-)-methyltransferase RumA7e-1065.1
NC_016023:2163000:2165768216576821671471380Bacillus coagulans 36D1 chromosome, complete genomeTrmA family RNA methyltransferase9e-1064.7
NC_008497:1575884:1589936158993615913091374Lactobacillus brevis ATCC 367, complete genometRNA (uracil-5-)-methyltransferase related enzyme1e-0964.7
NC_008609:2446246:2491555249155524930361482Pelobacter propionicus DSM 2379, complete genomeRNA methyltransferase, TrmA family1e-0964.7
NC_017195:709098:7133757133757147541380Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete23S rRNA (uracil-5-)-methyltransferase RumA1e-0964.7
NC_010520:3674883:3692782369278236941671386Clostridium botulinum A3 str. Loch Maree, complete genome23S rRNA (uracil-5-)-methyltransferase RumA2e-0963.5
NC_015977:255029:2599452599452613691425Roseburia hominis A2-183 chromosome, complete genomehypothetical RNA methyltransferase-like protein2e-0963.5
NC_015634:2445396:245889824588982459353456Bacillus coagulans 2-6 chromosome, complete genomeTrmA family RNA methyltransferase2e-0963.5
NC_016023:1769925:1774108177410817754811374Bacillus coagulans 36D1 chromosome, complete genomeTrmA family RNA methyltransferase2e-0963.5
NC_015731:1381737:1386834138683413879851152Nitrosomonas sp. Is79A3 chromosome, complete genome(Uracil-5)-methyltransferase2e-0963.5
NC_015634:2694706:2710711271071127120841374Bacillus coagulans 2-6 chromosome, complete genomeTrmA family RNA methyltransferase2e-0963.5
NC_014551:691594:6969316969316983071377Bacillus amyloliquefaciens DSM 7, complete genomeRNA methyltransferase, TrmA family2e-0963.5
NC_017188:635901:6402546402546416301377Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA methyltransferase, TrmA family protein2e-0963.5
NC_017190:678089:6824426824426838181377Bacillus amyloliquefaciens LL3 chromosome, complete genometrmA family RNA methyltransferase2e-0963.5
NC_017191:641923:6462766462766476521377Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA methyltransferase2e-0963.5
NC_014761:1321187:1333924133392413352071284Oceanithermus profundus DSM 14977 chromosome, complete genome23S rRNA m(5)u-1939 methyltransferase2e-0963.9
NC_012779:2424967:2424967242496724261001134Edwardsiella ictaluri 93-146, complete genome23S rRNA (uracil-5-)-methyltransferase RumB, putative2e-0963.9
NC_014551:809025:8135738135738149731401Bacillus amyloliquefaciens DSM 7, complete genomeRNA methyltransferase3e-0963.2
NC_017188:753039:7575887575887589881401Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA methyltransferase3e-0963.2
NC_017190:794820:7993697993698007691401Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA methyltransferase3e-0963.2
NC_017191:754453:7590027590027604021401Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA methyltransferase3e-0963.2
NC_009328:448224:4517734517734531671395Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeRNA methyltransferase-like protein3e-0963.2
NC_021175:687839:6903426903426917121371Streptococcus oligofermentans AS 1.3089, complete genomeRNA methyltransferase3e-0963.2
NC_014479:700281:7055377055377069161380Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative RNA methyltransferase3e-0963.2
NC_009454:1577319:1581422158142215828341413Pelotomaculum thermopropionicum SI, complete genomeSAM-dependent methyltransferases4e-0962.8
NC_014171:343834:3649883649883663641377Bacillus thuringiensis BMB171 chromosome, complete genometRNA (Uracil-5-)-methyltransferase4e-0962.8
NC_011772:323050:3425113425113438751365Bacillus cereus G9842, complete genomeRNA methyltransferase, TrmA family4e-0962.8
NC_020244:747762:7530187530187544091392Bacillus subtilis XF-1, complete genomeputative RNA methyltransferase5e-0962.4
NC_015160:2239933:2263635226363522650681434Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA methyltransferase, TrmA family7e-0962
NC_013508:2356865:2357384235738423585171134Edwardsiella tarda EIB202, complete genome23S rRNA metyluridine methyltransferase8e-0961.6
NC_015760:343874:3591223591223604771356Streptococcus salivarius CCHSS3, complete genomeRNA methyltransferase ywfF8e-0961.6
NC_019842:680000:6844036844036857971395Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,RNA methyltransferase9e-0961.6
NC_015711:6522808:6554166655416665554611296Myxococcus fulvus HW-1 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA1e-0860.8
NC_021182:3525523:3560638356063835620921455Clostridium pasteurianum BC1, complete genome23S rRNA (uracil-5-)-methyltransferase RumA1e-0861.2
NC_013929:2696648:2708880270888027101811302Streptomyces scabiei 87.22 chromosome, complete genometRNA methyltransferase1e-0861.6
NC_015425:1867620:1867620186762018689721353Clostridium botulinum BKT015925 chromosome, complete genomeTrmA family RNA methyltransferase1e-0861.6
NC_014376:1842290:1848420184842018497811362Clostridium saccharolyticum WM1 chromosome, complete genomeRNA methyltransferase, TrmA family2e-0860.1
NC_014376:3064787:3076793307679330784841692Clostridium saccharolyticum WM1 chromosome, complete genomeRNA methyltransferase, TrmA family2e-0860.1
NC_012658:3678000:3691945369194536933301386Clostridium botulinum Ba4 str. 657 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumA2e-0860.5
NC_006448:351998:3669713669713683351365Streptococcus thermophilus LMG 18311, complete genometRNA methyltransferase, TrmA family2e-0860.5
CP002207:193080:1973831973831987651383Bacillus atrophaeus 1942, complete genomeputative RNA methyltransferase2e-0860.5
NC_014639:193080:1973831973831987651383Bacillus atrophaeus 1942 chromosome, complete genomeRNA methyltransferase2e-0860.5
NC_006449:345396:3607503607503621141365Streptococcus thermophilus CNRZ1066, complete genometRNA methyltransferase, TrmA family2e-0860.5
NC_013515:715009:7189737189737203731401Streptobacillus moniliformis DSM 12112, complete genomeRNA methyltransferase, TrmA family2e-0860.8
NC_014219:2976642:2989301298930129906891389Bacillus selenitireducens MLS10 chromosome, complete genomeRNA methyltransferase, TrmA family3e-0859.7
NC_013895:117429:1204071204071217831377Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete23S rRNA (uracil-5-)-methyltransferase RumA3e-0859.7
NC_005071:786000:8030878030878044841398Prochlorococcus marinus str. MIT 9313, complete genomeSAM (and some other nucleotide) binding motif:RNA methyltrans...3e-0860.1
NC_014393:503230:5069595069595083771419Clostridium cellulovorans 743B chromosome, complete genomeRNA methyltransferase, TrmA family4e-0859.7
NC_013192:1504310:1521270152127015227001431Leptotrichia buccalis DSM 1135, complete genome(Uracil-5)-methyltransferase5e-0859.3
NC_011059:2478075:2506763250676325081991437Prosthecochloris aestuarii DSM 271, complete genomeRNA methyltransferase, TrmA family5e-0858.9
NC_009089:478328:4790684790684804351368Clostridium difficile 630, complete genomeputative tRNA (Uracil-5-)-methyltransferase7e-0858.5
NC_002932:2142000:7593759390441452Chlorobium tepidum TLS, complete genomeRNA methyltransferase, TrmA family8e-0858.5
NC_010278:1235934:1254365125436512555401176Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,23S rRNA methyluridine methyltransferase8e-0858.5
NC_016612:3361802:3383973338397333851031131Klebsiella oxytoca KCTC 1686 chromosome, complete genome23S rRNA methyluridine methyltransferase2e-0757
NC_012225:787737:8078748078748090701197Brachyspira hyodysenteriae WA1, complete genomeRNA methyltransferase, TrmA family2e-0757
NC_020064:1611820:1631703163170316328331131Serratia marcescens FGI94, complete genome23S rRNA (uracil-5-)-methyltransferase RumB2e-0757
NC_008262:419726:4215874215874229541368Clostridium perfringens SM101, complete genomeRNA methyltransferase, TrmA family2e-0757.4
NC_003366:461602:4701314701314714981368Clostridium perfringens str. 13, complete genomeRNA methyltransferase2e-0757.4
NC_014328:303063:3396363396363410661431Clostridium ljungdahlii ATCC 49587 chromosome, complete genomerRNA (uracil-5-)-methyltransferase2e-0757.4
NC_011883:2680380:2711111271111127127631653Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,(Uracil-5)-methyltransferase3e-0756.6
NC_016012:104500:1126961126961140661371Candidatus Arthromitus sp. SFB-rat-Yit, complete genome23S rRNA (uracil-5-)-methyltransferase RumA4e-0756.2
NC_002967:2656000:2660420266042026616341215Treponema denticola ATCC 35405, complete genomeRNA methyltransferase, TrmA family, putative7e-0755.1
NC_014643:609544:6242006242006253301131Rothia dentocariosa ATCC 17931 chromosome, complete genome23S rRNA (uracil-5-)-methyltransferase RumB2e-0653.5