Some Help

Query: NC_005810:3272765:3286599 Yersinia pestis biovar Microtus str. 91001, complete genome

Start: 3286599, End: 3287981, Length: 1383

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:4001154:4004156400415640055321377Yersinia pseudotuberculosis PB1/+, complete genomeHNH endonuclease0912
NC_010465:660207:6733476733476745251179Yersinia pseudotuberculosis YPIII, complete genomeHNH endonuclease1e-108394
NC_009708:633054:6461986461986473761179Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeHNH endonuclease domain-containing protein1e-108394
NC_017154:671816:6894306894306908121383Yersinia pestis D106004 chromosome, complete genomehypothetical protein0957
NC_003143:675622:6957286957286971101383Yersinia pestis CO92, complete genomehypothetical protein0957
NC_017160:676249:692288692288692602315Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-46187
NC_010634:3368000:336981533698153369928114Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0861.2
NC_007950:109399:115491115491116279789Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein7e-0858.9
NC_017265:3790750:3790750379075037921321383Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0957
NC_004088:3923804:3925388392538839267701383Yersinia pestis KIM, complete genomehypothetical protein0957
NC_006155:4062000:4063950406395040653261377Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein0913
NC_009381:1783886:178472717847271784840114Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-0861.2
NC_010159:3779129:379639837963983796511114Yersinia pestis Angola, complete genomehypothetical protein2e-0861.2
NC_009381:460358:4776954776954790771383Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0957
NC_008149:587689:6052996052996066811383Yersinia pestis Nepal516, complete genomehypothetical protein0957
NC_008150:2681327:270063127006312700744114Yersinia pestis Antiqua, complete genomehypothetical protein2e-0861.2
NC_014029:729675:7472787472787486601383Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0957
NC_008150:3495851:3496330349633034977121383Yersinia pestis Antiqua, complete genomehypothetical protein0957
NC_017160:676249:691615691615692211597Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-116418
NC_008149:1317109:133641313364131336526114Yersinia pestis Nepal516, complete genomehypothetical protein2e-0861.2
NC_014117:442616:483613483613484350738Burkholderia sp. CCGE1002 chromosome chromosome 1, completehypothetical protein2e-0653.9
NC_017191:1173989:1184555118455511864411887Bacillus amyloliquefaciens XH7 chromosome, complete genomephage DNA manipulating enzyme2e-32140
NC_017188:1172181:1182978118297811848641887Bacillus amyloliquefaciens TA208 chromosome, complete genomeYqcG2e-32140