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Query: NC_005810:1976000:1989036 Yersinia pestis biovar Microtus str. 91001, complete genome

Start: 1989036, End: 1989620, Length: 585

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:1880000:189277218927721893356585Yersinia pestis CO92, complete genomeflagellum biosynthesis transcription activator2e-112404
NC_014029:2607666:261479726147972615378582Yersinia pestis Z176003 chromosome, complete genomeflagellum biosynthesis transcription activator7e-112402
NC_009381:2009842:201660120166012017182582Yersinia pestis Pestoides F chromosome, complete genometranscriptional activator FlhC7e-112402
NC_010159:2955562:296291829629182963499582Yersinia pestis Angola, complete genomeflagellar transcriptional activator FlhC7e-112402
NC_015566:3269469:327051732705173271098582Serratia sp. AS12 chromosome, complete genomeflagellar transcriptional activator FlhC2e-99361
NC_014500:3071764:308923830892383089816579Dickeya dadantii 3937 chromosome, complete genomeflagellar transcriptional activator flhC6e-95346
NC_013592:1668092:169598716959871696565579Dickeya dadantii Ech586, complete genomeflagellar transcriptional activator FlhC3e-94343
NC_004547:1873390:193472419347241935302579Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar transcriptional activator5e-94343
NC_012917:2971702:298104129810412981619579Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar transcriptional activator FlhC9e-94342
NC_013421:2004088:201495220149522015530579Pectobacterium wasabiae WPP163, complete genomeflagellar transcriptional activator FlhC2e-93341
NC_012880:1765920:179207917920791792660582Dickeya dadantii Ech703, complete genomeflagellar transcriptional activator FlhC1e-92338
NC_017265:1715035:172919417291941729697504Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flagellar transcriptional activator flhC2e-89328
NC_004344:26828:383303833038884555Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-62236
NC_010694:1052722:106299510629951063531537Erwinia tasmaniensis, complete genomeFlagellum biosynthesis transcription activator5e-50197
NC_007973:1821753:183158118315811832222642Ralstonia metallidurans CH34 chromosome 1, complete sequenceflagellar transcriptional activator FlhC9e-48189
NC_015422:2858228:292180729218072922457651Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein1e-0652.8