Pre_GI: BLASTP Hits

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Query: NC_005810:1130251:1145115 Yersinia pestis biovar Microtus str. 91001, complete genome

Start: 1145115, End: 1146104, Length: 990

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004088:3382148:339701133970113398000990Yersinia pestis KIM, complete genomehypothetical protein0661
NC_003143:1233128:123682512368251237784960Yersinia pestis CO92, complete genomeputative prophage DNA primase0639
NC_008149:3251196:326609032660903267049960Yersinia pestis Nepal516, complete genomeprophage DNA primase0639
NC_008150:650899:653561653561654520960Yersinia pestis Antiqua, complete genomeputative prophage DNA primase0639
NC_010159:1417993:142097714209771421936960Yersinia pestis Angola, complete genome0639
NC_017168:4155143:415884141588414159800960Yersinia pestis A1122 chromosome, complete genomehypothetical protein0639
NC_017265:1136000:113815511381551139114960Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage DNA primase0639
NC_009381:2939782:295467529546752955634960Yersinia pestis Pestoides F chromosome, complete genomeprophage DNA primase0635
NC_017160:1507500:152274115227411523496756Yersinia pestis D182038 chromosome, complete genomeputative prophage DNA primase6e-138490
NC_017154:1225500:122811512281151228870756Yersinia pestis D106004 chromosome, complete genomeputative prophage DNA primase6e-138490
NC_014029:1283500:128602212860221286777756Yersinia pestis Z176003 chromosome, complete genomeputative prophage DNA primase6e-138490
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein2e-82306
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein2e-81302
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase4e-81301
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein8e-80297
NC_011083:2542876:2556453255645325591402688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,zinc-binding domain of primase-helicase family1e-67257
NC_014121:1101093:1113609111360911162962688Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc-binding domain of primase-helicase family protein1e-67256
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family8e-67254
NC_015061:1251905:1265618126561812682932676Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-67254
CP002797:2472908:2472908247290824755952688Escherichia coli NA114, complete genomeputative phage protein4e-67254
NC_013956:4326388:4327056432705643297282673Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha1e-63243
NC_011740:810411:8262408262408289122673Escherichia fergusonii ATCC 35469, complete genomePutative inner membrane protein (modular protein) from phage origin2e-61236
NC_011094:380428:3832303832303859022673Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-61235
NC_015968:3301958:3325863332586333285352673Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein5e-61234
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase5e-60231
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC8e-57221
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9272e-56219
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase1e-53210
NC_009778:567000:5928395928395951542316Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-53208
NC_013892:3278647:3281299328129932824681170Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase (fragment)8e-53207
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC1e-49197
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9273e-49195
NC_012917:833721:8345098345098368362328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family4e-45182
NC_020211:996497:1011327101132710136752349Serratia marcescens WW4, complete genomephage/plasmid primase, P4 family4e-45182
NC_012917:3684840:3686089368608936884162328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family6e-45181
NC_010694:2716348:2731726273172627345542829Erwinia tasmaniensis, complete genomePutative prophage primase4e-44179
NC_009436:3367194:3382164338216433844972334Enterobacter sp. 638, complete genomeplasmid and phage DNA primase9e-44177
NC_020211:103371:1041651041651064982334Serratia marcescens WW4, complete genomeP4-specific DNA primase8e-44177
NC_011080:4703266:4718963471896347212932331Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase8e-44177
NC_013956:3273340:3273675327367532759992325Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha6e-43174
NC_011080:2870428:2886088288608828884212334Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase6e-43174
NC_016810:2871689:2897858289785829002422385Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage P4 DNA primase1e-42174
NC_017046:2896651:2896651289665128989842334Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage P4 DNA primase8e-42171
NC_016857:2871689:2897909289790929002422334Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bacteriophage P4 DNA primase8e-42171
NC_013941:338121:3604753604753628652391Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAlpha replication protein of prophage CP-933I3e-41169
NC_002655:301940:3195023195023218922391Escherichia coli O157:H7 EDL933, complete genomealpha replication protein of prophage CP-933I3e-41169
NC_010102:2862178:2865648286564828679812334Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-41168
NC_003198:4676536:4692212469221246945452334Salmonella enterica subsp. enterica serovar Typhi str. CT18,Bacteriophage P4 DNA primase6e-41168
NC_010498:4072681:4089863408986340921962334Escherichia coli SMS-3-5, complete genomeD5 family nucleoside triphosphatase3e-40166
NC_013508:3593000:3604038360403836063652328Edwardsiella tarda EIB202, complete genomehypothetical protein2e-40166
NC_002695:301939:3195583195583218912334Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA primase2e-40166
NC_011353:305820:3234383234383257712334Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoside triphosphatase, D5 family2e-40166
NC_013008:306953:3247503247503270832334Escherichia coli O157:H7 str. TW14359 chromosome, complete genomealpha replication protein of prophage CP-933I2e-40166
NC_014306:4901390:4936659493665949389892331Erwinia billingiae Eb661, complete genomePhage/plasmid primase, P4 family4e-40165
NC_011740:448000:4485024485024508352334Escherichia fergusonii ATCC 35469, complete genomephage DNA primase4e-40165
NC_010468:1130000:1146686114668611490192334Escherichia coli ATCC 8739, complete genomephage/plasmid primase, P4 family5e-40165
NC_016845:575123:5911475911475934802334Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoside triphosphatase, D5 family1e-39164
NC_006511:4465495:4468141446814144704742334Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-39164
NC_011147:4460726:4463371446337144657042334Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-39164
NC_014306:4376012:4407434440743444097642331Erwinia billingiae Eb661, complete genomePlasmid and phage DNA primase7e-40164
NC_009778:2951207:2967702296770229701372436Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-38157
NC_021066:5342127:5355667535566753580092343Raoultella ornithinolytica B6, complete genomeZinc binding domain / DNA primase3e-37155
NC_007613:4217557:4217557421755742198902334Shigella boydii Sb227, complete genomeputative DNA primase7e-37154
NC_009648:4497749:450608345060834506706624Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-28127
NC_014121:677799:692723692723693337615Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage P4 DNA primase1e-26120
NC_012808:4078459:408016740801674081105939Methylobacterium extorquens AM1, complete genomehypothetical protein7e-2098.2
NC_012559:2353236:2355463235546323565391077Laribacter hongkongensis HLHK9, complete genomephage P4 alpha, zinc-binding domain protein1e-1584.3
NC_015761:2373967:2373967237396723770893123Salmonella bongori NCTC 12419, complete genomebacteriophage DNA primase2e-1584
NC_016026:2170500:218366521836652184543879Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein6e-1582
NC_007298:2856104:288973828897382890667930Dechloromonas aromatica RCB, complete genomehypothetical protein7e-1581.6
NC_014664:1614568:1614568161456816171172550Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein2e-1273.9
NC_008786:4102606:4119825411982541209101086Verminephrobacter eiseniae EF01-2, complete genomePhage P4 alpha, zinc-binding domain protein3e-1272.8
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein4e-1272.4
NC_004757:267165:267165267165268085921Nitrosomonas europaea ATCC 19718, complete genomeToprim domain6e-1272
NC_017033:2081206:210437521043752105307933Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein3e-1169.7
NC_013508:3188978:3219050321905032208851836Edwardsiella tarda EIB202, complete genomebacteriophage P4 DNA primase3e-1169.3
NC_007298:2769525:2771125277112527721351011Dechloromonas aromatica RCB, complete genomehypothetical protein5e-1168.6
NC_017506:2089769:209501420950142095910897Marinobacter adhaerens HP15 chromosome, complete genomevirulence-associated E family protein3e-1066.6
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein3e-1066.2
NC_016845:2274500:229102922910292292006978Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative phage DNA primase4e-1065.9
NC_008757:206036:2350042350042360291026Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completehypothetical protein4e-0962.4
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase4e-0962.4
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein4e-0962.4
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein7e-0961.6
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein7e-0961.6
NC_009256:2725836:2727734272773427301272394Burkholderia vietnamiensis G4 chromosome 1, complete sequenceTOPRIM domain-containing protein1e-0861.2
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein1e-0861.2
NC_012724:3222415:3224293322429332271692877Burkholderia glumae BGR1 chromosome 1, complete genomeInner membrane protein3e-0859.7
NC_003295:2669480:2689399268939926919452547Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-0859.3
NC_012796:1600600:1627250162725016291331884Desulfovibrio magneticus RS-1, complete genomehypothetical protein7e-0858.5
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein7e-0858.5
NC_009434:1580205:159532015953201596195876Pseudomonas stutzeri A1501, complete genomeTOPRIM domain-containing protein7e-0858.2
NC_010682:1624985:1642205164220516432811077Ralstonia pickettii 12J chromosome 1, complete sequenceP4 alpha zinc-binding domain protein9e-0858.2
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 21e-0757.8
NC_015968:3301958:330832433083243309295972Enterobacter asburiae LF7a chromosome, complete genomeP4 alpha zinc-binding domain-containing protein1e-0757.4
NC_014170:57954:6039860398622211824Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, completehypothetical protein2e-0757
NC_015422:2858228:2918095291809529190991005Alicycliphilus denitrificans K601 chromosome, complete genomeP4 alpha zinc-binding domain-containing protein3e-0756.6
NC_013892:2005480:200548020054802006460981Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0755.8
NC_013892:3803278:382965238296523830632981Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-0755.8
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein5e-0755.5
NC_014972:480355:4964064964064988622457Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein8e-0755.1
NC_012751:942315:9547339547339572192487Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA primase TraC3e-0653.1
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein8e-0651.6