Pre_GI: BLASTN Hits

Some Help

Query: NC_005364:292507 Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome

Start: 292507, End: 312732, Length: 20226

Host Lineage: Mycoplasma mycoides; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Causative agent of contagious pleuropneumonia in livestock. This genus belongs to the class Mollicutes (phylum Tenericutes), a taxonomic group of small (0.3-0.8 micron diameter) monoderm bacteria characterized by the lack of cell walls, reduced genome sizes, and obligate parasitic lifestyles (Krieg et al., 2010). Over 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. Infection typically proceeds through the attachment of bacteria to host cells via assorted adhesins or, in some species, through highly specialized surface protein appendages. In some cases, subsequent invasion of host cells results in a prolonged intracellular persistence that may cause lethality. These adaptive strategies are involved in host cell attachment and invasion, as well as immune evasion. Although mycoplasmas are dependent on their association with eukaryotic host tissue in nature, most can be cultivated axenically if their fastidious growth requirements are met. Nearly all mycoplasmas derive energy only from glycolytic pathways, whereas some can hydrolyze arginine. Assigned to the genus Mycoplasma by historic taxonomic precedent, organism in the Mycoplasma mycoides phylogenetic cluster are in fact more closely related to other genera in the Mollicutes (Krieg et al., 2010).




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014909:662500*66250068970227203Candidatus Blochmannia vafer str. BVAF chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013316:1225797*1225797124983024034Clostridium difficile R20291, complete genome9e-0660BLASTN svgBLASTP svg
NC_007929:11109211109213418323092Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006055:183823*18382321230928487Mesoplasma florum L1, complete genome9e-111408BLASTN svgBLASTP svg
NC_006055:44649*446497344628798Mesoplasma florum L1, complete genome2e-96361BLASTN svgBLASTP svg
NC_014760:101469*10146912432622858Mycoplasma bovis PG45 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007633:253143*25314327396420822Mycoplasma capricolum subsp. capricolum ATCC 27343, complete04169BLASTN svgBLASTP svg
NC_019949:525249*52524956698841740Mycoplasma cynos C142 complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019949:10341210341212608322672Mycoplasma cynos C142 complete genome7e-1693.7BLASTN svgBLASTP svg
NC_019949:56942656942659846929044Mycoplasma cynos C142 complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014921:87922887922890562126394Mycoplasma fermentans M64 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014448:626909*62690964844221534Mycoplasma hyorhinis HUB-1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014751:302152*30215232009917948Mycoplasma leachii PG50 chromosome, complete genome05416BLASTN svgBLASTP svg
NC_006908:71105071105073237021321Mycoplasma mobile 163K, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004432:80780*8078010222821449Mycoplasma penetrans HF-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002771:92135692135694467223317Mycoplasma pulmonis UAB CTIP, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015946:62968162968165574326063Mycoplasma putrefaciens KS1 chromosome, complete genome01524BLASTN svgBLASTP svg
NC_002162:643446*64344666409620651Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome1e-0869.9BLASTN svgBLASTP svg