Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3566940 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3566940, End: 3567554, Length: 615

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014541:2736641:274823027482302748823594Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF9381e-37155
NC_007645:5160133:516660851666085167204597Hahella chejuensis KCTC 2396, complete genomeSAM-dependent methyltransferase4e-36150
NC_009075:2428248:243011924301192430796678Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein3e-34144
NC_007435:1077792:108278810827881083465678Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein8e-34143
NC_006351:2398403:240027324002732400887615Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein1e-33142
NC_009078:2351046:235291723529172353594678Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein4e-33140
NC_007908:1946902:194843219484321949118687Rhodoferax ferrireducens T118, complete genomeprotein of unknown function DUF9385e-33140
NC_006349:400807:414431414431415045615Burkholderia mallei ATCC 23344 chromosome 2, complete sequencehypothetical protein8e-33140
NC_014532:1713987:172197817219781722712735Halomonas elongata DSM 2581, complete genomeprotein of unknown function DUF9382e-32139
NC_009079:402891:416560416560417237678Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein9e-33139
NC_008835:1827905:184451718445171845194678Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein9e-33139
NC_012988:1540587:154311915431191543754636Methylobacterium extorquens DM4, complete genomehypothetical protein5e-32137
NC_007650:722961:736894736894737571678Burkholderia thailandensis E264 chromosome II, complete sequenceProtein of unknown function (DUF938) superfamily9e-32136
NC_011757:1288637:129116812911681291803636Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF9381e-30133
NC_008312:7287000:730507073050707305693624Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function DUF9382e-30132
NC_007948:3541987:355966535596653560270606Polaromonas sp. JS666, complete genomeprotein of unknown function DUF9386e-30130
NC_005125:4062025:407960740796074080218612Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-29128
NC_008314:2686851:270631927063192706948630Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein2e-28125
NC_008319:1119076:113372311337231134358636Synechococcus sp. CC9311, complete genomeSAM-dependent methyltransferase7e-24110
NC_015554:3964000:397677339767733977387615Alteromonas sp. SN2 chromosome, complete genomehypothetical protein3e-23108
NC_017075:1869326:189219918921991892771573Rubrivivax gelatinosus IL144, complete genomehypothetical protein7e-21100