Pre_GI: BLASTP Hits

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Query: NC_005363:2588852:2589313 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2589313, End: 2590680, Length: 1368

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:2757081:2760762276076227621261365Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative phosphoenolpyruvate-protein phosphotransferase3e-57223
NC_015416:1645419:165362216536221654026405Methanosaeta concilii GP-6 chromosome, complete genomepyridoxamine 5'-phosphate oxidase-related, FMN-binding protein6e-0755.8
NC_018870:115982:145865145865146269405Thermacetogenium phaeum DSM 12270 chromosome, complete genomepyridoxamine 5'-phosphate oxidase-like protein4e-0653.1