Pre_GI: BLASTP Hits

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Query: NC_005303:780557:799001 Onion yellows phytoplasma OY-M, complete genome

Start: 799001, End: 799687, Length: 687

Host Lineage: Onion yellows phytoplasma; Phytoplasma; Acholeplasmataceae; Acholeplasmatales; Tenericutes; Bacteria

General Information: This strain (OY-M) is derived from a wild-type disease-causing strain (OY-W; onions yellow disease) which was isolated in Saga Prefecture, Japan, in 1982, and shows mild symptoms and does not cause stunting nor phloem hyperplasia (excessive increase in number of cells). Plant pathogenic bacterium. Phytoplasmas inhabit phloem (food-conducting vascular tissue) sieve elements of plants where they cause a variety of diseases. There is great interest in sequencing these organisms since they are currently unculturable and examination of the genome may lead to methods to deal with the diseases they cause including the development of antimicrobial agents. There is great interest in sequencing these organisms since they are currently unculturable and examination of the genome may lead to methods to deal with the diseases they cause including the development of antimicrobial agents.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007716:196000:214764214764215390627Aster yellows witches'-broom phytoplasma AYWB, complete genomeRNA polymerase sigma factor1e-66252
NC_005303:780557:800136800136800762627Onion yellows phytoplasma OY-M, complete genomeDNA-directed RNA polymerase sigma subunit1e-65249
NC_007716:225535:242894242894243499606Aster yellows witches'-broom phytoplasma AYWB, complete genomeRNA polymerase sigma factor2e-64245
NC_010544:313301:339928339928340599672Candidatus Phytoplasma australiense, complete genomeDNA-directed RNA polymerase,specialized sigma subunit1e-30133
NC_010544:395386:410521410521411192672Candidatus Phytoplasma australiense, complete genomePutative DNA-directed RNA polymerase,specialized sigma subunit1e-30133
NC_010544:816672:833979833979834650672Candidatus Phytoplasma australiense, complete genomeDNA-directed RNA polymerase specialized sigma subunit6e-30130
NC_011047:443475:477627477627478442816Candidatus Phytoplasma mali, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-1170.1
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor1e-1067
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-0860.1
NC_011761:2067695:208789920878992088756858Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigm-70 factor family1e-0756.6
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor1e-0756.6
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor2e-0755.8
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein2e-0755.8
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit6e-0754.3
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-0652.8