Pre_GI: BLASTP Hits

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Query: NC_005244:37546:41692 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Start: 41692, End: 42468, Length: 777

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:2181739:219074021907402191729990Hahella chejuensis KCTC 2396, complete genomePeriplasmic serine protease (ClpP class)4e-68258
NC_004757:1089057:111191311119131112866954Nitrosomonas europaea ATCC 19718, complete genomePeptidase family U72e-59228
NC_018691:3041851:304091430409143041891978Alcanivorax dieselolei B5 chromosome, complete genomePeptidase, S49 (Protease IV) family1e-58226
NC_010120:2098000:211408421140842114995912Neisseria meningitidis 053442, complete genomeprotease IV5e-49194
NC_017513:2134308:214772421477242148710987Neisseria meningitidis G2136 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type7e-49194
NC_016002:3077648:307958730795873080525939Pseudogulbenkiania sp. NH8B, complete genomepeptidase S493e-48192
NC_008767:2126854:214392621439262144912987Neisseria meningitidis FAM18, complete genomeputative protease2e-48192
NC_017511:1783000:179559917955991796585987Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative protease1e-47190
NC_011035:1876555:189174518917451892731987Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative protease1e-47190
NC_002946:1935186:193991319399131940899987Neisseria gonorrhoeae FA 1090, complete genomeputative protease1e-47190
NC_017514:2165166:218654521865452187531987Neisseria meningitidis M01-240149 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-47189
NC_017518:2190607:221198622119862212972987Neisseria meningitidis NZ-05/33 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-47189
NC_017517:2228000:225085122508512251837987Neisseria meningitidis M01-240355 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-47189
NC_017512:52228:567345673457720987Neisseria meningitidis WUE 2594, complete genomeputative peptidase4e-47188
NC_003116:291661:296167296167297153987Neisseria meningitidis Z2491, complete genomeprotease4e-47188
NC_017516:2183708:220294422029442203930987Neisseria meningitidis H44/76 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type4e-47188
NC_017501:2219803:224074022407402241726987Neisseria meningitidis 8013, complete genomeputative peptidase4e-47188
NC_003112:2215184:223442022344202235406987Neisseria meningitidis MC58, complete genomeputative protease4e-47188
NC_013016:44188:488924889249878987Neisseria meningitidis alpha14 chromosome, complete genomeputative ClpP class peptidase6e-47187
NC_017515:2194500:221341422134142214400987Neisseria meningitidis M04-240196 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-46186
NC_017505:2192284:220558922055892206575987Neisseria meningitidis alpha710 chromosome, complete genomeputative protease1e-46186
NC_015696:105748:110845110845111768924Francisella sp. TX077308 chromosome, complete genomeSignal peptide peptidase SppA, 36K type2e-45182
NC_015276:2171355:2185624218562421867271104Marinomonas mediterranea MMB-1 chromosome, complete genomepeptidase S492e-43176
NC_010336:733751:748666748666749310645Francisella philomiragia subsp. philomiragia ATCC 25017, completeserine peptidase, S49 family4e-40164
NC_015380:859424:874266874266875069804Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomemacromolecule degradation protein6e-26117
NC_020207:2240115:2244281224428122453151035Enterococcus faecium NRRL B-2354, complete genomeProtease IV6e-1994.4
NC_018604:1045774:106392310639231064756834Brachyspira pilosicoli WesB complete genomeperiplasmic serine proteases ClpP class1e-1894
NC_018607:1803500:180350718035071804340834Brachyspira pilosicoli B2904 chromosome, complete genomeperiplasmic serine proteases ClpP class1e-1894
NC_014330:2268773:228690422869042287737834Brachyspira pilosicoli 95/1000 chromosome, complete genomeperiplasmic serine proteases ClpP class1e-1893.6
NC_019908:982471:9842079842079853071101Brachyspira pilosicoli P43/6/78 chromosome, complete genomeperiplasmic serine proteases ClpP class2e-1892.8
NC_016631:5378810:5392974539297453940291056Granulicella mallensis MP5ACTX8 chromosome, complete genomesignal peptide peptidase SppA, 36K type5e-1788.2
NC_007604:1967770:199146919914691992281813Synechococcus elongatus PCC 7942, complete genomesignal peptide peptidase SppA, 36K type3e-1685.9
NC_013939:2117663:212898621289862129843858Deferribacter desulfuricans SSM1, complete genomesignal peptide peptidase SppA5e-1684.7
NC_019978:7535:214332143322431999Halobacteroides halobius DSM 5150, complete genomesignal peptide peptidase SppA, 36K type7e-1684.3
NC_014378:4428:165021650217482981Acetohalobium arabaticum DSM 5501 chromosome, complete genomesignal peptide peptidase SppA, 36K type3e-1479
NC_014933:3755000:3768570376857037703451776Bacteroides helcogenes P 36-108 chromosome, complete genomesignal peptide peptidase A3e-1479
NC_015636:1603664:160732116073211608253933Methanothermococcus okinawensis IH1 chromosome, complete genomesignal peptide peptidase SppA, 36K type5e-1478.2
NC_009483:2640403:264793626479362648832897Geobacter uraniireducens Rf4 chromosome, complete genomesignal peptide peptidase SppA, 36K type1e-1377
NC_009464:180335:205843205843206742900Uncultured methanogenic archaeon RC-I, complete genomeputative protease IV3e-1375.5
NC_007799:392355:392355392355393221867Ehrlichia chaffeensis str. Arkansas, complete genomesignal peptide peptidase SppA4e-1375.1
NC_007354:845500:868575868575869441867Ehrlichia canis str. Jake, complete genomePeptidase S49, SppA5e-1375.1
NC_019907:1411124:141473214147321415667936Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein6e-1374.7
NC_007109:808331:823905823905824819915Rickettsia felis URRWXCal2, complete genomeSignal peptide peptidase SppA6e-1374.7
NC_015216:1941000:196040119604011961339939Methanobacterium sp. AL-21 chromosome, complete genomesignal peptide peptidase SppA, 36K type7e-1374.3
NC_010475:1161000:1163563116356311653471785Synechococcus sp. PCC 7002, complete genomesignal peptide peptidase SppA, 67K type9e-1373.9
NC_017278:1873934:187719018771901878128939Thermus sp. CCB_US3_UF1 chromosome, complete genomesignal peptide peptidase SppA1e-1170.5
NC_006513:1379735:1379735137973513815761842Azoarcus sp. EbN1, complete genomeprotease IV1e-1170.5
NC_015672:1921023:195834619583461959218873Flexistipes sinusarabici DSM 4947 chromosome, complete genomesignal peptide peptidase SppA, 36K type1e-1170.1
NC_005213:202400:284247284247285017771Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein7e-1167.8
NC_014623:4535544:4546327454632745481051779Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase s49, protease iv7e-1167.8
NC_020126:10319500:1034097710340977103427641788Myxococcus stipitatus DSM 14675, complete genomesignal peptide peptidase SppA, 67K type2e-1066.2
NC_014844:762794:762794762794763783990Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesignal peptide peptidase SppA, 36K type2e-1065.9
NC_012039:185607:202129202129203022894Campylobacter lari RM2100, complete genomeprotease IV4e-1065.5
NC_011757:97281:115894115894116859966Methylobacterium chloromethanicum CM4, complete genomesignal peptide peptidase SppA, 36K type4e-1065.1
NC_012988:32996:561025610257067966Methylobacterium extorquens DM4, complete genomepeptidase1e-0963.5
NC_015577:3688071:3688680368868036903141635Treponema azotonutricium ZAS-9 chromosome, complete genomepeptidase S49, protease IV3e-0962.4
NC_010338:1394550:1398729139872914005161788Caulobacter sp. K31, complete genomesignal peptide peptidase SppA, 67K type4e-0962
NC_010793:81219:897388973890646909Orientia tsutsugamushi str. Ikeda, complete genomeprotease IV4e-0961.6
NC_002488:2546495:2561252256125225631531902Xylella fastidiosa 9a5c, complete genomeprotease IV6e-0961.2
NC_010981:242500:2555742555742566201047Wolbachia pipientis, complete genomePutative minor capsid protein c2e-0859.3
NC_010981:314745:3290943290943301401047Wolbachia pipientis, complete genomePutative minor capsid protein c2e-0859.3
NC_010981:314745:3486623486623497081047Wolbachia pipientis, complete genomePutative minor capsid protein c2e-0859.3
NC_008340:362000:376939376939377937999Alkalilimnicola ehrlichei MLHE-1, complete genomepeptidase S493e-0858.9
NC_012913:626449:6485646485646504501887Aggregatibacter aphrophilus NJ8700, complete genomesignal peptide peptidase SppA, 67K type5e-0858.2
NC_020211:2882093:2885421288542128864671047Serratia marcescens WW4, complete genomeputative inner membrane peptidase7e-0857.8
NC_008701:1259000:1265587126558712672391653Pyrobaculum islandicum DSM 4184, complete genomepeptidase S499e-0857.4
NC_016612:3803130:383199638319963832916921Klebsiella oxytoca KCTC 1686 chromosome, complete genomeserine peptidase9e-0857.4
NC_014804:401313:4013134013134023291017Thermococcus barophilus MP chromosome, complete genomeprotease IV2e-0756.6
NC_010981:1371265:1380688138068813817251038Wolbachia pipientis, complete genomePutative minor capsid protein c2e-0756.2
NC_013364:2522888:2553321255332125548261506Escherichia coli O111:H- str. 11128, complete genomeputative head protein/prohead protease3e-0755.8
NC_010981:425387:4541834541834552441062Wolbachia pipientis, complete genomeputative minor capsid protein c3e-0755.8
NC_008570:3777469:3779795377979537816391845Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesignal peptide peptidase SppA, 67K type4e-0755.1
NC_013410:1203937:1203937120393712062312295Fibrobacter succinogenes subsp. succinogenes S85 chromosome,signal peptide peptidase SppA, 36K type6e-0754.7
NC_002978:234082:2553352553352564291095Wolbachia endosymbiont of Drosophila melanogaster, complete genome6e-0754.7
NC_011751:1377457:1377457137745713789051449Escherichia coli UMN026 chromosome, complete genomeHead-tail preconnector protein GP51e-0653.9
NC_011750:1931384:1950548195054819520531506Escherichia coli IAI39 chromosome, complete genomehead-tail preconnector protein GP51e-0653.5
NC_002937:2263763:2266987226698722682071221Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeminor capsid protein C2e-0653.1
NC_016602:2586044:2586044258604425878941851Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceprotease IV2e-0652.8
CP002185:1770815:1770815177081517721341320Escherichia coli W, complete genomepeptidase S492e-0652.8
NC_012416:753500:7747037747037757401038Wolbachia sp. wRi, complete genomeminor capsid protein C, putative3e-0652.8
NC_011750:1565000:1580862158086215823281467Escherichia coli IAI39 chromosome, complete genomeminor capsid protein C from bacteriophage origin3e-0652.8
NC_013941:699286:7222137222137235321320Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeminor capsid protein C3e-0652.4
CU928160:1668842:1668842166884216702961455Escherichia coli IAI1 chromosome, complete genomeMinor capsid protein C from bacteriophage origin3e-0652.4
NC_011741:1668842:1668842166884216702961455Escherichia coli IAI1 chromosome, complete genomeMinor capsid protein C from bacteriophage origin3e-0652.4
NC_004431:3040953:3040953304095330423861434Escherichia coli CFT073, complete genomePutative capsid protein of prophage3e-0652.4
NC_011745:2025725:2044233204423320457381506Escherichia coli ED1a chromosome, complete genomehead-tail preconnector protein GP54e-0652
NC_002655:1909139:1912872191287219143771506Escherichia coli O157:H7 EDL933, complete genomeputative head-tail preconnector protein of prophage CP-933O4e-0652
NC_011745:1055354:1056936105693610584411506Escherichia coli ED1a chromosome, complete genomehead-tail preconnector protein GP54e-0652
NC_011353:1195179:1198642119864212001471506Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehead-tail preconnector protein GP54e-0652
NC_002695:2158314:2176525217652521778441320Escherichia coli O157:H7 str. Sakai, complete genomeputative minor capsid protein precursor5e-0651.6
NC_013361:2169948:2188230218823021895491320Escherichia coli O26:H11 str. 11368 chromosome, complete genomecapsid protein/prohead protease5e-0651.6
NC_013361:1896446:1898028189802818993471320Escherichia coli O26:H11 str. 11368 chromosome, complete genomehead protein/prohead protease5e-0651.6
NC_013941:1963523:1982422198242219839271506Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeperiplasmic serine proteases (ClpP class)5e-0651.6
NC_013941:2425233:2456727245672724582321506Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeperiplasmic serine proteases (ClpP class)5e-0651.6
NC_013941:5317424:5333780533378053352851506Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehead-tail preconnector protein GP56e-0651.2
NC_006526:1976779:1979705197970519816181914Zymomonas mobilis subsp. mobilis ZM4, complete genomeperiplasmic serine protease6e-0651.2
NC_013364:863209:8647248647248662291506Escherichia coli O111:H- str. 11128, complete genomeputative head protein/prohead protease7e-0651.2
NC_013361:3112023:3110528311052831120331506Escherichia coli O26:H11 str. 11368 chromosome, complete genomehead protein/prohead protease7e-0651.2
NC_011742:585908:5859085859085874131506Escherichia coli S88 chromosome, complete genomehead-tail preconnector protein GP58e-0650.8
NC_013757:21245:3224732247335001254Geodermatophilus obscurus DSM 43160, complete genomepeptidase S498e-0650.8
NC_014034:1507047:153012915301291531079951Rhodobacter capsulatus SB1003 chromosome, complete genomeS49 family peptidase1e-0550.8