Pre_GI: BLASTP Hits

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Query: NC_005244:37546:37133 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Start: 37133, End: 37573, Length: 441

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012691:779826:801775801775802461687Tolumonas auensis DSM 9187, complete genomehypothetical protein5e-1476.6
NC_007005:1705406:172171817217181722419702Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-1375.1
NC_004129:5373886:538118153811815381870690Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-1165.9
NC_002940:78392:792317923179968738Haemophilus ducreyi 35000HP, complete genomehypothetical protein1e-0961.6
NC_008463:5246954:525450852545085255209702Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0857.4
NC_018080:5091772:509999150999915100692702Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-0857
NC_009656:4527457:457678245767824577483702Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-0857
NC_012779:305969:324506324506325228723Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0755.5
NC_015567:313035:314780314780315496717Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-0755.1
NC_009832:4564752:456702845670284567747720Serratia proteamaculans 568, complete genomehypothetical protein2e-0754.7
NC_014029:331919:349287349287350003717Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-0753.9
NC_009705:78000:929879298793670684Yersinia pseudotuberculosis IP 31758 plasmid_153kb, completehypothetical protein5e-0753.1
NC_011750:1978801:200340720034072004126720Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-0652
NC_009832:358291:360027360027360572546Serratia proteamaculans 568, complete genomehypothetical protein2e-0650.8
NC_013421:701005:736693736693737391699Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-0650.4