Pre_GI: BLASTP Hits

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Query: NC_005140:883857:892280 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 892280, End: 892627, Length: 348

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005140:883857:896641896641896988348Vibrio vulnificus YJ016 chromosome II, complete sequencevpf119 homologue4e-62236
NC_013457:140474:159781159781160140360Vibrio sp. Ex25 chromosome 2, complete genomeintegrase phage related protein1e-47187
NC_009783:2306953:230810223081022308461360Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-47186
NC_014966:919442:920895920895921245351Vibrio vulnificus MO6-24/O chromosome II, complete sequencephage integrase/RstB phage-related integrase5e-1269.7