Pre_GI: BLASTP Hits

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Query: NC_005140:660305:675959 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 675959, End: 676837, Length: 879

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:638355:653937653937654815879Vibrio vulnificus MO6-24/O chromosome II, complete sequencetype II/IV secretion system protein TadC, associated with Flp pilus assembly1e-131469
NC_004605:741000:757085757085757951867Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadC9e-83306
NC_004460:81687:978079780798217411Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadC3e-58225
NC_013716:4306695:437314943731494374000852Citrobacter rodentium ICC168, complete genomeputative tight adherence protein C3e-21102
NC_010634:3905369:392231239223123923145834Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein2e-20100
NC_005810:3333000:334157133415713342404834Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-20100
NC_008149:650706:659167659167660000834Yersinia pestis Nepal516, complete genomehypothetical protein2e-20100
NC_004088:3859173:387207038720703872903834Yersinia pestis KIM, complete genomehypothetical protein2e-20100
NC_003143:741169:749629749629750462834Yersinia pestis CO92, complete genomehypothetical protein2e-20100
NC_010159:259695:272592272592273425834Yersinia pestis Angola, complete genometype II secretion system protein2e-20100
NC_008150:3430000:344295234429523443785834Yersinia pestis Antiqua, complete genomehypothetical protein2e-20100
NC_009381:522731:531190531190532023834Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-20100
NC_014029:792719:801173801173802006834Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-20100
NC_017160:737000:745514745514746347834Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-20100
NC_017168:341233:354840354840355673834Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-20100
NC_017265:3724500:373743037374303738263834Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system protein TadC,associated with Flp pilus assembly2e-20100
NC_006155:3992818:401085140108514011684834Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-20100
NC_009708:692508:701022701022701855834Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein7e-2097.8
NC_013416:668152:679472679472680338867Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadC5e-1995.1
NC_016513:974402:985732985732986598867Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadC1e-1894
NC_012913:167034:175091175091175957867Aggregatibacter aphrophilus NJ8700, complete genomeTadC6e-1891.7
NC_010465:733916:741391741391742224834Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein2e-1790.1
NC_017154:734875:743335743335743916582Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-1687.4
NC_015224:3820338:384678638467863847610825Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein4e-1582
NC_008800:3955284:396851239685123969336825Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein8e-1581.3
NC_004463:3857763:386687838668783867786909Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein9e-1477.8
NC_007794:1553000:156879815687981569766969Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein2e-1273.6
NC_011894:2618951:265844826584482659359912Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein1e-1170.5
NC_013223:1349000:136377313637731364735963Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein2e-1169.7
NC_010334:2749250:275649927564992757461963Shewanella halifaxensis HAW-EB4, complete genometype II secretion system protein1e-1067.4
NC_010338:4530403:455221745522174553203987Caulobacter sp. K31, complete genometype II secretion system protein8e-1064.7
NC_009485:1604942:160494216049421605904963Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein7e-1064.7
NC_009901:2427291:244682424468242447786963Shewanella pealeana ATCC 700345, complete genometype II secretion system protein4e-0858.9
NC_008536:5259438:527477652747765275690915Solibacter usitatus Ellin6076, complete genometype II secretion system protein4e-0858.9
NC_016002:2453919:249679124967912497735945Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein1e-0757.4
NC_010718:2460893:246133624613362462289954Natranaerobius thermophilus JW/NM-WN-LF, complete genometype II secretion system protein5e-0755.1
NC_007498:2046935:205190820519082052888981Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadC8e-0754.7
NC_011769:3434744:346172334617233462703981Desulfovibrio vulgaris str. 'Miyazaki F', complete genometype II secretion system protein1e-0653.9
NC_008609:2933468:293861629386162939524909Pelobacter propionicus DSM 2379, complete genometype II secretion system protein2e-0653.5
NC_018867:361423:379126379126380067942Dehalobacter sp. CF chromosome, complete genomeType II/IV secretion system protein TadC, associated with Flp pilus assembly2e-0653.1
NC_015588:95697:109575109575110474900Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein3e-0652.8