Some Help

Query: NC_005140:444353:462537 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 462537, End: 463889, Length: 1353

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1718088:1737236173723617384561221Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein0826
NC_016944:975725:9977329977329989281197Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein4e-36152
NC_009457:471337:4914494914494926451197Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein4e-36152
NC_017270:885179:9036819036819048771197Vibrio cholerae LMA3984-4 chromosome chromosome I, completeCapsular polysaccharide synthesis enzyme CpsB2e-35150
NC_012912:4012112:4036389403638940376751287Dickeya zeae Ech1591, complete genomeputative capsular polysaccharide biosynthesis protein7e-1995.5
NC_014500:564864:5691635691635704491287Dickeya dadantii 3937 chromosome, complete genomecapsular polysaccharide synthesis protein CpsB4e-1893.2
NC_012108:2874831:2915389291538929167021314Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-0758.2