Pre_GI: BLASTP Hits

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Query: NC_005140:444353:461990 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 461990, End: 462523, Length: 534

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1718088:173668917366891737180492Vibrio vulnificus CMCP6 chromosome II, complete sequencePeriplasmic protein involved in polysaccharide export8e-82302
NC_012912:4012112:403583040358304036387558Dickeya zeae Ech1591, complete genomepolysaccharide export protein4e-36150
NC_014500:564864:570451570451571008558Dickeya dadantii 3937 chromosome, complete genomecapsular polysaccharide synthesis protein Cpsc5e-36150
NC_017270:885179:904881904881905408528Vibrio cholerae LMA3984-4 chromosome chromosome I, completeCapsular polysaccharide synthesis enzyme CpsC, polysaccharide export7e-32136
NC_014816:2357000:237123523712352371801567Asticcacaulis excentricus CB 48 chromosome 1, complete sequencepolysaccharide export protein2e-1995.1
NC_008358:2808299:281087828108782811465588Hyphomonas neptunium ATCC 15444, complete genomepolysaccharide biosynthesis/export protein3e-1581.6
NC_016815:1085462:1087030108703010882831254Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceputative polysaccharide export protein4e-1374.3
NC_007712:1601499:1612003161200316131391137Sodalis glossinidius str. 'morsitans', complete genomeamylovoran export outer membrane protein AmsH5e-1373.9
NC_018000:3371829:3388659338865933899121254Sinorhizobium fredii USDA 257 chromosome, complete genomeexopolysaccharide production protein ExoF1e-1168.9
NC_014654:646500:6590596590596601771119Halanaerobium sp. 'sapolanicus' chromosome, complete genomepolysaccharide export protein7e-1166.6
NC_012691:3126500:3146464314646431477111248Tolumonas auensis DSM 9187, complete genomepolysaccharide export protein9e-1166.2
NC_017030:2299592:232496423249642325578615Corallococcus coralloides DSM 2259 chromosome, complete genomepolysaccharide biosynthesis/export protein1e-1065.9
NC_011283:1690193:1699259169925917003921134Klebsiella pneumoniae 342 chromosome, complete genomecapsule polysaccharide biosynthesis/export protein GfcE2e-1065.5
NC_013850:1658010:1667064166706416682031140Klebsiella variicola At-22 chromosome, complete genomepolysaccharide export protein2e-1065.5
NC_012917:1506083:1513147151314715142831137Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepolysaccharide export protein2e-1065.1
NC_016602:103878:1419501419501430861137Vibrio furnissii NCTC 11218 chromosome 1, complete sequencePeriplasmic protein involved in capsular polysaccharide export2e-1065.1
NC_004547:1600900:1607969160796916091051137Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative polysaccharide export protein3e-1064.7
NC_020211:1704500:1712997171299717141331137Serratia marcescens WW4, complete genomelipoprotein required for capsular polysaccharide translocation through the outer membrane4e-1064.3
NC_020064:1547524:1555311155531115564471137Serratia marcescens FGI94, complete genomeperiplasmic protein involved in polysaccharide export4e-1064.3
NC_008570:3220539:3234098323409832352131116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecapsular polysaccharide transport protein5e-1063.9
NC_011753:206178:2061782061782073141137Vibrio splendidus LGP32 chromosome 1, complete genomeputative periplasmic protein involved in capsular polysaccharide export (wza)7e-1063.5
NC_009800:2156091:2175221217522121763571137Escherichia coli HS, complete genomepolysaccharide biosynthesis/export protein7e-1063.5
NC_016613:221476:2449942449942461301137Vibrio sp. EJY3 chromosome 1, complete sequencepolysaccharide export protein Wza9e-1063.2
NC_018679:3197347:321778332177833218415633Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completepolysaccharide biosynthesis/export protein9e-1063.2
NC_014500:1491660:1499292149929215004281137Dickeya dadantii 3937 chromosome, complete genomecapsule polysaccharide export protein1e-0962.8
NC_010524:3914880:392341439234143924055642Leptothrix cholodnii SP-6, complete genomepolysaccharide export protein1e-0962.8
NC_008228:1404126:141159914115991412234636Pseudoalteromonas atlantica T6c, complete genomepolysaccharide export protein1e-0962.8
NC_021066:460292:4696784696784708141137Raoultella ornithinolytica B6, complete genomepolysaccharide export protein Wza1e-0962.8
NC_013421:3279499:3305691330569133068271137Pectobacterium wasabiae WPP163, complete genomepolysaccharide export protein1e-0962.8
NC_015497:3739556:376355437635543764189636Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide export protein2e-0962
NC_016818:3887000:3907932390793239090651134Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export2e-0962
NC_017068:1788235:181607218160721816791720Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative polysaccharide export protein2e-0962
NC_015566:1659288:1676468167646816776041137Serratia sp. AS12 chromosome, complete genomepolysaccharide export protein2e-0962
NC_015567:1660462:1676480167648016776161137Serratia sp. AS9 chromosome, complete genomepolysaccharide export protein2e-0962
NC_010505:4820000:4843996484399648453541359Methylobacterium radiotolerans JCM 2831, complete genomepolysaccharide export protein2e-0962
NC_014121:1038554:1047714104771410488531140Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative polysaccharide export protein2e-0962
NC_020181:360500:3716303716303727661137Enterobacter aerogenes EA1509E, complete genomePolysaccharide export lipoprotein Wza2e-0962
NC_012108:2874831:291670629167062917500795Desulfobacterium autotrophicum HRM2, complete genomeGumA2e-0961.6
NC_013960:3326955:333881833388183339459642Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide export protein, PEP-CTERM sytem-associated4e-0960.8
NC_015422:704500:712290712290712931642Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide export protein4e-0960.8
NC_014910:755192:772970772970773611642Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide export protein, pep-cterm sytem-associated4e-0960.8
NC_015873:924392:926797926797927453657Megasphaera elsdenii DSM 20460, complete genomepolysaccharide export protein6e-0960.5
NC_014839:253961:2624842624842636231140Pantoea sp. At-9b plasmid pPAT9B02, complete sequencepolysaccharide export protein6e-0960.1
NC_013889:2603914:261983126198312620469639Thioalkalivibrio sp. K90mix chromosome, complete genomepolysaccharide export protein8e-0960.1
NC_014315:1956695:196631119663111966937627Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide export protein8e-0960.1
NC_005139:343500:3439443439443451761233Vibrio vulnificus YJ016 chromosome I, complete sequenceouter membrane capsular polysaccharide transport protein1e-0859.7
NC_018868:1960542:199578919957891996400612Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide biosynthesis/export protein1e-0859.7
NC_012108:2194251:221851722185172219101585Desulfobacterium autotrophicum HRM2, complete genomeperiplasmic polysaccharide export protein1e-0859.7
NC_016818:3851542:3867325386732538684551131Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export9e-0959.7
NC_017047:3907854:3922992392299239240171026Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza8e-0959.7
NC_011566:1597751:1617896161789616189751080Shewanella piezotolerans WP3, complete genomePeriplasmic protein involved in capsular polysaccharide export1e-0859.3
NC_015633:461143:4635934635934647531161Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-0859.3
NC_015061:3840463:3855601385560138567311131Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein2e-0858.9
NC_010511:1590500:1596949159694915993992451Methylobacterium sp. 4-46 chromosome, complete genomepolysaccharide export protein2e-0858.9
NC_015061:3840463:3897283389728338984251143Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein4e-0857.8
NC_017047:3936624:3958958395895839600911134Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza4e-0857.4
NC_012791:2052923:2058726205872620598441119Variovorax paradoxus S110 chromosome 1, complete genomepolysaccharide export protein5e-0857.4
NC_015437:27325:321923219233025834Selenomonas sputigena ATCC 35185 chromosome, complete genomepolysaccharide export protein6e-0857
NC_008789:1669082:167054916705491671172624Halorhodospira halophila SL1, complete genomepolysaccharide export protein5e-0857
NC_015554:817500:824730824730825365636Alteromonas sp. SN2 chromosome, complete genomepolysaccharide biosynthesis/export protein1e-0755.8
NC_013740:660880:662107662107662760654Acidaminococcus fermentans DSM 20731, complete genomepolysaccharide export protein1e-0755.8
NC_017030:3668146:368615136861513686720570Corallococcus coralloides DSM 2259 chromosome, complete genomepolysaccharide biosynthesis/export protein2e-0755.5
NC_011662:1211660:1216366121636612176611296Thauera sp. MZ1T, complete genomepolysaccharide export protein2e-0755.5
NC_012214:1588573:1592479159247915936211143Erwinia pyrifoliae Ep1/96, complete genomeexport outer membrane protein Wza (synonym for CpsH, similar to AmsH), involved in exopolysaccharid synthesis2e-0755.5
NC_005125:3446470:3445476344547634465401065Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0755.1
NC_007947:2140000:216640221664022167214813Methylobacillus flagellatus KT, complete genomepolysaccharide export protein3e-0754.7
NC_015942:1167785:1191581119158111927081128Acidithiobacillus ferrivorans SS3 chromosome, complete genomepolysaccharide export protein4e-0754.3
NC_011001:1462532:1469947146994714711281182Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative polysaccharide export protein4e-0754.3
NC_020054:1002906:100514710051471006109963Fibrella aestuarina BUZ 2 drat genomepolysaccharide export outer membrane protein5e-0753.9
NC_005125:3981987:3990396399039639914841089Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0753.9
NC_014121:3483976:3507532350753235087641233Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepolysaccharide export protein5e-0753.9
NC_007952:1453000:1456808145680814578661059Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative capsular polysaccharide transport outermembrane protein6e-0753.5
NC_015675:3046852:3071456307145630728831428Mesorhizobium opportunistum WSM2075 chromosome, complete genomepolysaccharide export protein6e-0753.5
NC_009932:39348:4786047860493261467Acaryochloris marina MBIC11017 plasmid pREB7, complete sequencepolysaccharide export protein8e-0753.1
NC_015458:3390674:3393375339337533944931119Pusillimonas sp. T7-7 chromosome, complete genomepolysaccharide export protein9e-0753.1
NC_017323:599549:6047406047406061701431Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencepolysaccharide export protein1e-0652.8
NC_004556:1611973:162098016209801621633654Xylella fastidiosa Temecula1, complete genomeGumB protein1e-0652.8
NC_007512:1539095:1547465154746515485531089Pelodictyon luteolum DSM 273, complete genomecapsular polysaccharide export protein, putative1e-0652.8
NC_015731:1299955:130382813038281304640813Nitrosomonas sp. Is79A3 chromosome, complete genomepolysaccharide export protein EpsE1e-0652.8
NC_014935:1704816:173602917360291736760732Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepolysaccharide export protein2e-0652.4
NC_015376:965000:9772579772579784261170Burkholderia gladioli BSR3 chromosome chromosome 2, completepolysaccharide export protein2e-0652.4
NC_010513:1590758:160442316044231605172750Xylella fastidiosa M12 chromosome, complete genomeGumB protein1e-0652.4
NC_012969:1931595:1947273194727319483281056Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepolysaccharide export protein EpsE1e-0652.4
NC_014931:5088125:5112099511209951131721074Variovorax paradoxus EPS chromosome, complete genomepolysaccharide export protein1e-0652.4
NC_003078:671000:7094637094637108301368Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative OMA family outer membrane saccharide export protein, similar to ExoF1e-0652.4
NC_015222:1203465:121074412107441211562819Nitrosomonas sp. AL212 chromosome, complete genomepolysaccharide export protein EpsE2e-0652
NC_011145:4960940:4960940496094049620461107Anaeromyxobacter sp. K, complete genomepolysaccharide export protein3e-0651.6
NC_012968:1945614:196696719669671967761795Methylotenera mobilis JLW8, complete genomepolysaccharide export protein EpsE2e-0651.6
NC_007489:42500:4544345443465251083Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequencePolysaccharide export protein2e-0651.6
NC_008781:3365468:3395688339568833968631176Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide export protein2e-0651.6
NC_016815:844350:8583018583018596741374Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceexoF exopolysaccharide production protein ExoF precursor2e-0651.6
NC_007645:2779381:278535327853532785991639Hahella chejuensis KCTC 2396, complete genomePeriplasmic protein involved in polysaccharide export4e-0651.2
NC_010506:2046000:2046048204604820487952748Shewanella woodyi ATCC 51908, complete genomepolysaccharide export protein4e-0651.2
NC_019940:1059000:105971810597181060458741Thioflavicoccus mobilis 8321 chromosome, complete genomepolysaccharide export protein3e-0651.2
NC_008782:3167440:318096631809663181778813Acidovorax sp. JS42, complete genomepolysaccharide export protein3e-0651.2
NC_014355:2321957:235048923504892351100612Candidatus Nitrospira defluvii, complete genomeputative polysaccharide export protein (fragment)3e-0651.2
NC_015663:4950000:5001409500140950025481140Enterobacter aerogenes KCTC 2190 chromosome, complete genomepolysaccharide export protein Wza8e-0650.1
NC_013960:1319349:133406613340661334890825Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide export protein8e-0650.1
NC_000853:648075:6700826700826730602979Thermotoga maritima MSB8, complete genomepolysaccharide export protein, putative9e-0649.7
NC_011978:15059:1505915059178692811Thermotoga neapolitana DSM 4359, complete genomePolysaccharide export protein9e-0649.7
NC_009832:1719149:1727572172757217287081137Serratia proteamaculans 568, complete genomepolysaccharide export protein9e-0649.7