Pre_GI: BLASTP Hits

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Query: NC_005140:340000:351323 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 351323, End: 352339, Length: 1017

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012918:1660477:1671703167170316728481146Geobacter sp. M21 chromosome, complete genomeRelA/SpoT domain-containing protein6e-51201
NC_013209:867500:8747428747428758601119Acetobacter pasteurianus IFO 3283-01, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017100:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-03, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017108:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-12, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017111:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-32, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017121:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-07, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017125:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-22, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_017146:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-26, complete genomestringent response modulating ppGpp metabolism protein4e-49195
NC_003888:7706226:7715801771580177168441044Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-43177
NC_017045:1:426442645052789Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,putative BCR/ Guanosine polyphosphate pyrophosphohydrolase/ synthetase1e-40167
NC_008380:2210649:2223311222331122244711161Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein3e-38159
NC_015968:3301958:3313377331337733144861110Enterobacter asburiae LF7a chromosome, complete genomeRelA/SpoT domain-containing protein4e-37155
NC_020260:440000:4474354474354485351101Cronobacter sakazakii Sp291, complete genomeGTP pyrophosphokinase3e-35149
NC_007712:1516589:1528945152894515300601116Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-33142
NC_014121:2090630:209746720974672098267801Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-27124
NC_015978:996933:996933996933997580648Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein1e-1274.3
NC_014219:1736000:175326017532601753901642Bacillus selenitireducens MLS10 chromosome, complete genomeRelA/SpoT domain protein5e-1272.4
NC_007622:2501562:251674625167462517438693Staphylococcus aureus RF122, complete genomehypothetical protein2e-1170.1
NC_008525:1202852:120366412036641204278615Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized protein, RelA_SpoT domain3e-1169.7
NC_017337:2588331:260423926042392604931693Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein3e-1169.7
NC_002952:2653482:266901826690182669710693Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein3e-1169.7
NC_016605:766836:785960785960786613654Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeputative GTP pyrophosphokinase3e-1169.7
NC_017347:2616000:263608526360852636777693Staphylococcus aureus subsp. aureus T0131 chromosome, completeRelA/SpoT domain-containing protein3e-1169.7
NC_017342:751496:754105754105754797693Staphylococcus aureus subsp. aureus TCH60 chromosome, completeGTP-pyrophosphokinase2e-1169.7
NC_009513:618000:636671636671637324654Lactobacillus reuteri F275, complete genomeRelA/SpoT domain protein3e-1169.3
NC_015697:1814128:183949118394911840144654Lactobacillus reuteri SD2112 chromosome, complete genomeGTP diphosphokinase6e-1168.6
NC_018664:1279950:129239312923931293172780Clostridium acidurici 9a chromosome, complete genomeputative GTP pyrophosphokinase2e-0963.9
NC_008529:735233:757722757722758336615Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeRelA /SpoT (ppGpp synthetase/hydrolase) catalytic domain6e-0962
NC_008054:745704:766821766821767435615Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein1e-0861.2
NC_015385:456000:475632475632476363732Treponema succinifaciens DSM 2489 chromosome, complete genomeRelA/SpoT domain protein1e-0860.8
NC_015873:1119500:112029711202971120911615Megasphaera elsdenii DSM 20460, complete genomerelA/SpoT domain protein5e-0858.9
NC_008699:2294361:234055423405542341225672Nocardioides sp. JS614, complete genomeRelA/SpoT domain protein1e-0757.4
NC_004459:2443000:255320425532042553977774Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-0756.6
NC_006087:2439252:244342324434232444145723Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein6e-0755.5
NC_008011:213386:2133862133862155812196Lawsonia intracellularis PHE/MN1-00, complete genomeGuanosine polyphosphate pyrophosphohydrolases/synthetases1e-0653.9
NC_016779:4825599:4841935484193548430321098Bacillus cereus F837/76 chromosome, complete genomehypothetical protein2e-0653.5
NC_013446:2237854:2239726223972622419572232Comamonas testosteroni CNB-2, complete genome(p)ppGpp synthetase I, SpoT/RelA2e-0653.1