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Query: NC_005140:1820970:1831196 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 1831196, End: 1831675, Length: 480

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016628:763833:785829785829786308480Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein4e-88323
NC_004460:1237129:124744012474401247856417Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein2e-76283
NC_013173:1712138:171551017155101715974465Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF14562e-23107
NC_008800:3123495:312678431267843127254471Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-21101
NC_015224:1641819:165943216594321659902471Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-21101
NC_009792:642881:645329645329645799471Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1995.1
NC_009633:3522933:353838035383803538907528Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein8e-1992.8
NC_014935:1511835:153032615303261530802477Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein1e-1685.9