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Query: NC_005140:1820970:1829772 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 1829772, End: 1830803, Length: 1032

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1237129:1245983124598312469841002Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein0687
NC_014562:3985500:3993096399309639941271032Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein ypfG precursor2e-52206
NC_015663:1902344:1924474192447419265612088Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein9e-52204
NC_021066:3703725:3708011370801137100982088Raoultella ornithinolytica B6, complete genomehypothetical protein3e-49196
NC_013850:4993307:5020069502006950221562088Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF11769e-44177
NC_004547:843475:8515638515638526331071Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-41171
NC_005085:1498000:150056415005641501562999Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-26120
NC_014837:3126543:3133518313351831345911074Pantoea sp. At-9b chromosome, complete genomehypothetical protein9e-0651.2