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Query: NC_005139:796546 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 796546, End: 819915, Length: 23370

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence013900BLASTN svgBLASTP svg
NC_005139:2201820*2201820227810176282Vibrio vulnificus YJ016 chromosome I, complete sequence02847BLASTN svgBLASTP svg
NC_002505:86078986078988990629118Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02817BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete6e-69270BLASTN svgBLASTP svg
NC_009052:43357544335754435735621603Shewanella baltica OS155, complete genome9e-68266BLASTN svgBLASTP svg
NC_002505:19317501931750195259920850Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete4e-30141BLASTN svgBLASTP svg
NC_008786:39150003915000394226927270Verminephrobacter eiseniae EF01-2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008571:74450074450076227117772Gramella forsetii KT0803, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016012:66517166517168380618636Candidatus Arthromitus sp. SFB-rat-Yit, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:10536181053618108982736210Dickeya zeae Ech1591, complete genome2e-0765.9BLASTN svgBLASTP svg