Query: NC_005139:518760 Vibrio vulnificus YJ016 chromosome I, complete sequence
Start: 518760, End: 537053, Length: 18294
Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria
General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015633:2801321 | 2801321 | 2825466 | 24146 | Vibrio anguillarum 775 chromosome chromosome I, complete sequence | 2e-133 | 484 | BLASTN svg | BLASTP svg |
NC_006371:1848487 | 1848487 | 1866199 | 17713 | Photobacterium profundum SS9 chromosome 2, complete sequence | 6e-124 | 452 | BLASTN svg | BLASTP svg |
NC_009784:1231791 | 1231791 | 1254200 | 22410 | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence | 4e-119 | 436 | BLASTN svg | BLASTP svg |
NC_004460:973738 | 973738 | 998644 | 24907 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 1e-75 | 291 | BLASTN svg | BLASTP svg |
NC_010498:4856011 | 4856011 | 4876266 | 20256 | Escherichia coli SMS-3-5, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_002655:3769643* | 3769643 | 3814343 | 44701 | Escherichia coli O157:H7 EDL933, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
CU928160:3030324* | 3030324 | 3068231 | 37908 | Escherichia coli IAI1 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
CU928145:3196173* | 3196173 | 3232847 | 36675 | Escherichia coli 55989 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
AP010958:3474077* | 3474077 | 3513395 | 39319 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_002695:3702344* | 3702344 | 3747037 | 44694 | Escherichia coli O157:H7 str. Sakai, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_009801:3175714 | 3175714 | 3211099 | 35386 | Escherichia coli E24377A, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_010067:1116148 | 1116148 | 1139330 | 23183 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_011748:3196173* | 3196173 | 3232847 | 36675 | Escherichia coli 55989, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_011750:3407500* | 3407500 | 3437261 | 29762 | Escherichia coli IAI39 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_011751:3285646* | 3285646 | 3331266 | 45621 | Escherichia coli UMN026 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_020260:440000* | 440000 | 468196 | 28197 | Cronobacter sakazakii Sp291, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012880:2399205* | 2399205 | 2420502 | 21298 | Dickeya dadantii Ech703, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010473:3069529* | 3069529 | 3100598 | 31070 | Escherichia coli str. K-12 substr. DH10B, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010468:906957* | 906957 | 948035 | 41079 | Escherichia coli ATCC 8739, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009800:2995958 | 2995958 | 3023384 | 27427 | Escherichia coli HS, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007384:3151344* | 3151344 | 3178401 | 27058 | Shigella sonnei Ss046, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_000913:2975659* | 2975659 | 3006728 | 31070 | Escherichia coli K12, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
AC_000091:2976293 | 2976293 | 3008631 | 32339 | Escherichia coli W3110 DNA, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |