Pre_GI: BLASTP Hits

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Query: NC_005139:796546:796546 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 796546, End: 797766, Length: 1221

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:349500:3977443977443988711128Vibrio vulnificus CMCP6 chromosome I, complete sequenceD-alanine-D-alanine ligase0771
NC_013858:477298:4876784876784893961719Azospirillum sp. B510 plasmid pAB510d, complete sequencehypothetical protein1e-75284
NC_016609:4834378:4835840483584048376271788Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein1e-41171