Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:518760:532848 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 532848, End: 533078, Length: 231

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015633:2801321:2816080281608028176121533Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase4e-37152
NC_009784:1231791:1231791123179112333231533Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein9e-36148
NC_020304:752012:7688947688947704471554Desulfocapsa sulfexigens DSM 10523, complete genometransposase2e-1374.7
NC_020304:1222000:1242238124223812437911554Desulfocapsa sulfexigens DSM 10523, complete genometransposase2e-1374.7
NC_008750:1253354:1263607126360712651481542Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region1e-1272
NC_008740:2989856:2990543299054329920841542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-1271.6
NC_008740:3520500:3531509353150935330501542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-1271.6
NC_008740:4109000:4109567410956741111081542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-1271.6
NC_008738:1:1630116301178421542Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequenceIntegrase, catalytic region1e-1271.6
NC_007645:6461267:6474373647437364759141542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family2e-1168.2
NC_007645:5747721:5749500574950057510411542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family2e-1168.2
NC_007645:6350079:6367193636719363687341542Hahella chejuensis KCTC 2396, complete genometransposase, IS21 family2e-1168.2
NC_006177:46745:648886488865106219Symbiobacterium thermophilum IAM 14863, complete genomeputative transposase subunit4e-1166.6
NC_009434:3611738:3683250368325036847641515Pseudomonas stutzeri A1501, complete genomeISPsy14, transposase1e-1065.5
NC_009434:608765:6498756498756513891515Pseudomonas stutzeri A1501, complete genomeISPsy14, transposase2e-1064.3
NC_006177:280234:3076823076823092081527Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit4e-1063.5
NC_012587:2326000:232910923291092329927819Rhizobium sp. NGR234, complete genomeamino-terminus of transposase TRm23a-like protein7e-1062.4
NC_012586:897148:920288920288921106819Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceTrm23a-like transposase, amino-terminus7e-1062.4
NC_016815:844350:8628668628668644161551Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTransposase for insertion sequence IS1326/IS13531e-0961.6
NC_016815:1543308:1543308154330815448581551Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTransposase for insertion sequence IS1326/IS13531e-0961.6
NC_016812:4246542:4251400425140042529501551Sinorhizobium fredii HH103, complete genomeputative transposase for insertion sequence IS4081e-0961.6
NC_016812:258500:2692812692812708311551Sinorhizobium fredii HH103, complete genomeputative transposase for insertion sequence IS4081e-0961.6
NC_006177:2883476:2894345289434528958711527Symbiobacterium thermophilum IAM 14863, complete genometransposase subunit2e-0961.2
NC_009428:1827352:1854220185422018557521533Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeintegrase catalytic subunit2e-0961.2
NC_017325:967598:9816259816259831751551Sinorhizobium meliloti SM11 chromosome, complete genomeTRm23a transposase3e-0960.5
NC_016812:3641786:3663067366306736646171551Sinorhizobium fredii HH103, complete genomeputative transposase y4uI5e-0959.7
NC_015740:2614317:2635592263559226371061515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_015740:3631326:3654574365457436560881515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_015740:4072415:4078101407810140796151515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_015740:2407500:2438489243848924400031515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_015740:3631326:3632727363272736342411515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_015740:141910:1566021566021581161515Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase subunit5e-0959.7
NC_008740:1484531:1502877150287715044181542Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region8e-0958.9
NC_015711:8964410:121712171708492Myxococcus fulvus HW-1 chromosome, complete genomeIS21 family transposase2e-0857.8
NC_007951:2904644:2927207292720729287601554Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase5e-0856.6
NC_012691:1743038:1773360177336017749011542Tolumonas auensis DSM 9187, complete genomeIntegrase catalytic region1e-0755.1
NC_017249:8427163:8448059844805984494171359Bradyrhizobium japonicum USDA 6, complete genometransposase1e-0755.1
NC_017249:8221992:8271347827134782727051359Bradyrhizobium japonicum USDA 6, complete genometransposase1e-0755.1
NC_015554:4824000:4826991482699148284541464Alteromonas sp. SN2 chromosome, complete genomeintegrase catalytic subunit1e-0755.1
NC_009348:1475955:1530946153094615324871542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009348:2125698:2145116214511621466571542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009348:47974:6152661526630671542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009348:1064664:1077134107713410786751542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009348:3029963:3051855305185530533961542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009350:137645:1393901393901409311542Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completetransposase subunit 12e-0754.7
NC_009348:1347500:1358541135854113600821542Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase subunit 12e-0754.7
NC_009349:78000:8019980199817401542Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetransposase subunit 12e-0754.7
NC_014228:3534378:3551654355165435531981545Xenorhabdus nematophila ATCC 19061, complete genometransposase2e-0754.7
NC_014228:1712339:1722894172289417244381545Xenorhabdus nematophila ATCC 19061, complete genometransposase2e-0754.7
NC_012586:922095:9243909243909259401551Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase number 1 for insertion sequence NGRIS-3e2e-0754.3
NC_000914:198000:2184582184582200081551Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceY4kJ2e-0754.3
NC_012587:2298324:2314945231494523164951551Rhizobium sp. NGR234, complete genomeputative transposase number 1 for insertion sequence NGRIS-3g2e-0754.3
NC_014394:738365:7499867499867515061521Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region2e-0754.3
NC_006177:1422932:143417414341741434545372Symbiobacterium thermophilum IAM 14863, complete genometransposase-like protein2e-0754.3
NC_008577:1455000:1463938146393814654791542Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region3e-0753.5
NC_008563:3119284:3137704313770431392451542Escherichia coli APEC O1, complete genomeputative transposase for ISEc124e-0753.5
NC_007384:1086025:1092084109208410936191536Shigella sonnei Ss046, complete genomeputative transposase5e-0753.1
NC_007384:1763375:1767851176785117693861536Shigella sonnei Ss046, complete genomeputative transposase5e-0753.1
NC_016822:1839739:1845837184583718473721536Shigella sonnei 53G, complete genometransposase5e-0753.1
NC_016822:267758:2755732755732771081536Shigella sonnei 53G, complete genometransposase5e-0753.1
NC_016822:2940000:2957005295700529585401536Shigella sonnei 53G, complete genometransposase5e-0753.1
NC_008095:4189082:4213467421346742150051539Myxococcus xanthus DK 1622, complete genometransposase, IS21 family7e-0752.8
NC_008095:2497842:2505965250596525075031539Myxococcus xanthus DK 1622, complete genometransposase, IS21 family7e-0752.8
NC_010660:33109:373143731437610297Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-0651.6
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF12e-0651.2
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF12e-0651.2
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF12e-0651.2
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF12e-0651.2
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF12e-0651.2
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF12e-0651.2
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF12e-0651.2
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF12e-0651.2
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF12e-0651.2
NC_002678:4885790:489044648904464891153708Mesorhizobium loti MAFF303099, complete genometransposase2e-0651.2
NC_010801:550270:5882805882805898361557Burkholderia multivorans ATCC 17616 chromosome 3, completeIS408a transposase2e-0650.8
NC_010087:319063:3350223350223365781557Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region2e-0650.8
NC_010805:575709:6269336269336284891557Burkholderia multivorans ATCC 17616 chromosome 2, completeIS408a transposase2e-0650.8
NC_009255:1105786:1127023112702311285791557Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0650.8
NC_010086:1816378:1846815184681518483711557Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region2e-0650.8