Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:343500:345316 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 345316, End: 345687, Length: 372

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007954:3171081:320178832017883202183396Shewanella denitrificans OS217, complete genomeS23 ribosomal8e-30129
NC_008700:2701500:272696427269642727350387Shewanella amazonensis SB2B, complete genomeS23 ribosomal7e-29125
NC_010334:1783500:178638017863801786775396Shewanella halifaxensis HAW-EB4, complete genomeS23 ribosomal protein2e-28124
NC_009901:1693500:169758916975891697948360Shewanella pealeana ATCC 700345, complete genomeS23 ribosomal protein2e-26117
NC_012997:1446037:144856214485621448921360Teredinibacter turnerae T7901, complete genomehypothetical protein7e-26115
NC_014532:1579419:158329315832931583646354Halomonas elongata DSM 2581, complete genomehypothetical protein1e-24111
NC_008322:1595500:160153616015361601889354Shewanella sp. MR-7, complete genomeS23 ribosomal protein2e-24111
NC_009438:2939478:295950829595082959861354Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein1e-23108
NC_008321:1523323:152597715259771526330354Shewanella sp. MR-4, complete genomeS23 ribosomal protein2e-23107
NC_008345:3394154:340174634017463402129384Shewanella frigidimarina NCIMB 400, complete genomeS23 ribosomal protein3e-22103
NC_010506:2046000:204899920489992049376378Shewanella woodyi ATCC 51908, complete genomeS23 ribosomal protein7e-22102
NC_010803:2067539:210797921079792108347369Chlorobium limicola DSM 245, complete genomeS23 ribosomal protein2e-1994.4
NC_011901:2914000:292823429282342928590357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-1992.4
NC_010831:2078329:211085321108532111221369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein2e-1891.3
NC_010831:2078329:210598721059872106355369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein2e-1891.3
NC_010831:2078329:210208521020852102453369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein2e-1891.3
NC_014803:475355:495520495520495864345Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein2e-1890.9
NC_014394:1373602:137939213793921379772381Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein6e-1889.4
NC_013522:1538994:156347115634711563845375Thermanaerovibrio acidaminovorans DSM 6589, complete genomeS23 ribosomal protein1e-1788.2
NC_013959:2892660:292553729255372925911375Sideroxydans lithotrophicus ES-1 chromosome, complete genomeS23 ribosomal protein2e-1787.4
NC_011979:1590432:159420515942051594585381Geobacter sp. FRC-32, complete genomeS23 ribosomal protein5e-1786.3
NC_013740:660880:678247678247678612366Acidaminococcus fermentans DSM 20731, complete genomeS23 ribosomal protein5e-1786.3
NC_009483:4434375:447088444708844471255372Geobacter uraniireducens Rf4 chromosome, complete genomeS23 ribosomal protein8e-1785.5
NC_013791:1291339:130440013044001304756357Bacillus pseudofirmus OF4 chromosome, complete genomeS23 ribosomal1e-1685.1
NC_008639:2968000:299543929954392995807369Chlorobium phaeobacteroides DSM 266, complete genomeS23 ribosomal protein1e-1684.7
NC_013173:2884887:293016129301612930508348Desulfomicrobium baculatum DSM 4028, complete genomeS23 ribosomal protein2e-1684.3
NC_013791:1291339:130680313068031307159357Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein2e-1684.3
NC_010730:952574:961458961458961814357Sulfurihydrogenibium sp. YO3AOP1, complete genomeS23 ribosomal protein6e-1682.8
NC_009483:4434375:446040544604054460776372Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-1582
NC_009483:4434375:446758944675894467945357Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-1580.1
NC_008009:5139896:517351851735185173901384Acidobacteria bacterium Ellin345, complete genomeS23 ribosomal1e-1478.2
NC_003272:637970:643318643318643719402Nostoc sp. PCC 7120, complete genomehypothetical protein7e-1269.3
NC_014933:3715467:372722337272233727594372Bacteroides helcogenes P 36-108 chromosome, complete genomeS23 ribosomal protein7e-1269.3
NC_012997:1446037:144806914480691448248180Teredinibacter turnerae T7901, complete genomehypothetical protein2e-1167.8
NC_008346:800500:801484801484801876393Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein4e-1166.6
NC_009767:997500:102362810236281024056429Roseiflexus castenholzii DSM 13941, complete genomeS23 ribosomal protein8e-1165.9
NC_020050:296702:310734310734311084351Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialS23 ribosomal protein8e-1165.9
NC_009454:259022:2674472674472709293483Pelotomaculum thermopropionicum SI, complete genome23S ribosomal RNA7e-1165.9
NC_009454:1042592:1050854105085410543363483Pelotomaculum thermopropionicum SI, complete genome23S ribosomal RNA1e-1065.5
NC_015672:399522:406322406322406681360Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein2e-1064.3
NC_019978:2260395:227383322738332274183351Halobacteroides halobius DSM 5150, complete genomeS23 ribosomal protein3e-1063.5
NC_015672:399522:408139408139408501363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein6e-1062.8
NC_019978:2260395:226532522653252265675351Halobacteroides halobius DSM 5150, complete genomeS23 ribosomal protein8e-1062.4
NC_014758:1207894:122541412254141225845432Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein1e-0962
NC_013740:842841:850155850155850508354Acidaminococcus fermentans DSM 20731, complete genomeS23 ribosomal protein2e-0960.8
NC_015958:2206032:222026422202642220662399Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeS23 ribosomal protein5e-0959.7
NC_015672:399522:404152404152404514363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein1e-0858.9
NC_015388:1913118:193235519323551932735381Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeS23 ribosomal protein4e-0857
NC_013223:724394:771073771073771333261Desulfohalobium retbaense DSM 5692, complete genome6e-0856.2
NC_010831:2078329:209972420997242099981258Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein7e-0855.8
NC_008346:36176:4599045990495183529Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete23S ribosomal RNA2e-0754.7
NC_007498:2087811:209526320952632095646384Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-0754.3
NC_010571:4483500:449950544995054499888384Opitutus terrae PB90-1, complete genomeS23 ribosomal protein3e-0753.9
NC_008510:995612:1004999100499910085743576Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,6e-0752.8
NC_015914:5470926:547953654795365479913378Cyclobacterium marinum DSM 745 chromosome, complete genomeS23 ribosomal protein3e-0650.8
NC_008510:995612:100626810062681006633366Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,23S rRNA gene intervening sequence Orf4e-0650.1