Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:2731623:2741159 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2741159, End: 2744158, Length: 3000

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:1679335:1685633168563316891903558Vibrio vulnificus CMCP6 chromosome I, complete sequenceSuperfamily II DNA helicase01801
NC_014965:670115:6764996764996800413543Vibrio vulnificus MO6-24/O chromosome I, complete sequencemembrane protein01784
NC_018868:973379:989726989726990019294Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein7e-25117
NC_010162:6562571:659191865919186592292375Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-22108
NC_010995:4403463:440595444059544406244291Cellvibrio japonicus Ueda107, complete genomePAAR motif family2e-22108
NC_015963:117178:131738131738132037300Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencePAAR repeat-containing protein2e-22108
CU928145:3360967:337919333791933379498306Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein9e-1893.2
NC_011748:3360967:337919333791933379498306Escherichia coli 55989, complete genomehypothetical protein9e-1893.2
NC_011744:688000:691396691396691692297Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein2e-1688.6
NC_004547:1873390:1918143191814319198851743Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-1378.2
NC_014500:4691915:470598547059854706401417Dickeya dadantii 3937 chromosome, complete genomeUropathogenic specific protein4e-1274.3
NC_002516:891000:899138899138899656519Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-1274.3
NC_011770:4924127:496817449681744968692519Pseudomonas aeruginosa LESB58, complete genomehypothetical protein5e-1273.9
NC_008463:4743296:475772047577204758238519Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-1273.9
NC_003295:3688000:3698062369806236992221161Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN6e-1170.5
NC_014307:1:2937629376305271152Ralstonia solanacearum CFBP2957 chromosome, complete genomemembrane protein1e-1069.7
NC_013961:2861949:2867965286796528722124248Erwinia amylovora, complete genomeProtein rhsC precursor2e-1068.9
NC_013961:2579000:2604838260483826091184281Erwinia amylovora, complete genomeProtein rhsB precursor2e-1068.9
NC_013971:2617000:2642366264236626466464281Erwinia amylovora ATCC 49946 chromosome, complete genomeRhs family protein2e-1068.9
NC_014311:1:2607126071272731203Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-1068.6
NC_007492:3655545:366747436674743668013540Pseudomonas fluorescens PfO-1, complete genomePAAR4e-1067.8
NC_007492:4310828:431809443180944318639546Pseudomonas fluorescens PfO-1, complete genomePAAR4e-1067.8
NC_004547:3817656:3837677383767738390501374Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phospholipase1e-0966.2
NC_014228:3442159:3447150344715034515804431Xenorhabdus nematophila ATCC 19061, complete genomeputative Rhs family protein3e-0965.1
NC_012214:1267589:1272737127273712770234287Erwinia pyrifoliae Ep1/96, complete genomeRhs family protein3e-0964.7
NC_005773:3253575:3264780326478032660121233Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRhs family protein5e-0964.3
NC_007511:719493:7243637243637287034341Burkholderia sp. 383 chromosome 2, complete sequenceRhs family protein8e-0963.5
NC_015968:4117835:413173341317334132011279Enterobacter asburiae LF7a chromosome, complete genomePaaR repeat-containing protein1e-0863.2
NC_010322:3084834:3092337309233730935571221Pseudomonas putida GB-1 chromosome, complete genomePAAR repeat-containing protein2e-0862.4
NC_010694:962383:9681079681079724144308Erwinia tasmaniensis, complete genomeRhs family protein2e-0862
NC_016816:3373950:3373950337395033781104161Pantoea ananatis LMG 5342, complete genomeRhs family protein2e-0862
NC_013956:1207500:1225161122516112293544194Pantoea ananatis LMG 20103 chromosome, complete genomeRhsD3e-0861.6
NC_004578:2797493:2797493279749328009333441Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0861.6
NC_017068:1732857:173682017368201737170351Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-0861.6
NC_010625:670482:681696681696681950255Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePAAR repeat-containing protein3e-0861.6
NC_012962:3463644:3484950348495034892214272Photorhabdus asymbiotica, complete genomeputative membrane-bound sugar-binding protein4e-0861.2
NC_005773:2641715:2648352264835226494911140Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRhs family protein6e-0860.8
NC_005126:349658:3726773726773771044428Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0860.5
NC_003197:332086:3325513325513366454095Salmonella typhimurium LT2, complete genomeputative RHS-like protein7e-0860.5
NC_016856:332771:3332363332363373304095Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative RHS-like protein7e-0860.5
NC_016860:332087:3325523325523366464095Salmonella enterica subsp. enterica serovar Typhimurium strputative RHS-like protein7e-0860.5
NC_016863:332060:3325253325253366194095Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative RHS-like protein7e-0860.5
NC_011205:329155:3318333318333355193687Salmonella enterica subsp. enterica serovar Dublin str. CT_020218536e-0860.5
NC_011094:334267:3347323347323384183687Salmonella enterica subsp. enterica serovar Schwarzengrund str6e-0860.5
NC_016810:329849:3325213325213361233603Salmonella enterica subsp. enterica serovar Typhimurium strRhs family protein8e-0860.1
NC_016857:329849:3325213325213361233603Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Rhs1 protein8e-0860.1
NC_003198:331314:3313143313143353784065Salmonella enterica subsp. enterica serovar Typhi str. CT18,Rhs-family protein8e-0860.1
NC_013592:1668092:1668092166809216723724281Dickeya dadantii Ech586, complete genomeYD repeat protein1e-0759.3
NC_013421:385930:3859303859303900694140Pectobacterium wasabiae WPP163, complete genomeYD repeat protein1e-0759.3
NC_017046:329847:3325253325253338201296Salmonella enterica subsp. enterica serovar Typhimurium str. 798Rhs-family protein (SPI-6 associated)2e-0758.9
NC_014500:894136:9073929073929116964305Dickeya dadantii 3937 chromosome, complete genomeRhs-family protein2e-0758.9
NC_013956:3273340:3277830327783032789931164Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0758.9
NC_008740:2989856:299294929929492993920972Marinobacter aquaeolei VT8, complete genomePAAR repeat-containing protein2e-0758.9
NC_011080:333121:3357993357993398784080Salmonella enterica subsp. enterica serovar Newport str. SL254,Rhs-family protein2e-0758.9
NC_014500:3097362:3131418313141831357284311Dickeya dadantii 3937 chromosome, complete genomeRhs-family protein2e-0758.5
NC_012962:1068102:1105653110565311100084356Photorhabdus asymbiotica, complete genomehypothetical protein3e-0758.2
NC_012912:1701231:1720854172085417252274374Dickeya zeae Ech1591, complete genomeYD repeat protein3e-0758.2
NC_012912:483390:4833904833904878174428Dickeya zeae Ech1591, complete genomeYD repeat protein3e-0758.2
NC_004547:3207776:3207776320777632120354260Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative RHS protein3e-0758.2
NC_007511:1780500:1787577178757717922474671Burkholderia sp. 383 chromosome 2, complete sequenceRhs family protein1e-0656.2
NC_013421:553193:570426570426570692267Pectobacterium wasabiae WPP163, complete genomePAAR repeat-containing protein1e-0656.2
NC_012912:2901021:292103129210312921555525Dickeya zeae Ech1591, complete genomePAAR repeat-containing protein1e-0655.8
NC_002506:298868:304670304670305200531Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-0655.1
NC_012580:301500:305869305869306399531Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein3e-0655.1
NC_012583:335000:339539339539340069531Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-0655.1
NC_012667:1045782:105514610551461055676531Vibrio cholerae MJ-1236 chromosome 2, complete genomeuropathogenic specific protein3e-0655.1
NC_016446:26500:311153111531645531Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-0655.1
NC_016945:300000:304637304637305167531Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-0655.1
NC_013282:1256769:128772312877231287983261Cronobacter turicensis, complete genomehypothetical protein3e-0654.7
NC_014121:3188928:3200343320034332045994257Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeRhs family protein5e-0653.9
NC_011742:1528668:153884215388421539126285Escherichia coli S88 chromosome, complete genomehypothetical protein5e-0653.9
NC_007946:1586656:159683015968301597114285Escherichia coli UTI89, complete genomehypothetical protein5e-0653.9
NC_008563:1577879:158574915857491586033285Escherichia coli APEC O1, complete genomehypothetical protein5e-0653.9
NC_011751:1714131:172057217205721720856285Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-0653.9