Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:2731623:2731623 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2731623, End: 2732528, Length: 906

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:670115:688852688852689730879Vibrio vulnificus MO6-24/O chromosome I, complete sequenceprotease4e-175613
NC_004459:1679335:169803016980301698908879Vibrio vulnificus CMCP6 chromosome I, complete sequenceCollagenase8e-175612
NC_013166:1841446:184144618414461842327882Kangiella koreensis DSM 16069, complete genomepeptidase U321e-65250
NC_014532:722151:735080735080736000921Halomonas elongata DSM 2581, complete genomehypothetical protein3e-65248
NC_006526:1976779:197677919767791977732954Zymomonas mobilis subsp. mobilis ZM4, complete genomecollagenase2e-38159
NC_007626:506532:522253522253523158906Magnetospirillum magneticum AMB-1, complete genomeCollagenase and related protease3e-35149