Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2261122 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2261122, End: 2261436, Length: 315

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013731:11605:3720137201398462646Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencehypothetical protein1e-22105
NC_015977:2807782:2826779282677928293762598Roseburia hominis A2-183 chromosome, complete genomeputative type III restriction-modification enzyme, helicase subunit fused to restriction endonuclease-like domain containing protein7e-22102