Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:2201820:2229391 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2229391, End: 2232885, Length: 3495

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016613:2139276:2139276213927621428483573Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein1e-83312
NC_016445:1363831:1389595138959513931673573Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-81304
NC_002505:1892430:1918195191819519218573663Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-81304
NC_012578:1838470:1865328186532818689903663Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein3e-81304
NC_012668:1688500:1725651172565117293133663Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-81304
NC_016944:1937645:1964503196450319680753573Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-81304
NC_012582:1976962:2002717200271720063793663Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein8e-81302
NC_009457:1444449:1471298147129814749603663Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein8e-81302
NC_020156:737063:7546537546537581593507Nonlabens dokdonensis DSW-6, complete genomehypothetical protein4e-28127
NC_015977:935798:9531829531829566493468Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-22107
NC_013199:1407742:1415301141530114187563456Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF2e-20102