Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2224170 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2224170, End: 2225993, Length: 1824

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:72952:1134831134831153601878Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein9e-104377
NC_014151:3611956:3635718363571836375321815Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein9e-49195
NC_013223:1763631:1781443178144317832691827Desulfohalobium retbaense DSM 5692, complete genomehypothetical protein2e-45184
NC_016604:917972:9179729179729197681797Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein2e-42174
NC_012108:4971086:5005265500526550071301866Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein3e-38160
NC_011071:429204:4513564513564531941839Stenotrophomonas maltophilia R551-3, complete genomehypothetical protein5e-38159
NC_017955:4075804:4095758409575840974521695Modestobacter marinus, complete genomehypothetical protein5e-38159
NC_015416:161289:1612891612891631841896Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein2e-37157
NC_013173:1437464:1446250144625014480581809Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein6e-37155
NC_007925:4355413:4374566437456643764071842Rhodopseudomonas palustris BisB18, complete genomehypothetical protein4e-36153
NC_014973:3452100:3478066347806634798801815Geobacter sp. M18 chromosome, complete genomehypothetical protein3e-35150
NC_015152:2549756:2584765258476525865911827Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein6e-35149
NC_018581:2768743:2802553280255328043311779Gordonia sp. KTR9 chromosome, complete genomehypothetical protein4e-32140
NC_014830:3387479:3415732341573234175401809Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein1e-29132
NC_013172:606387:6063876063876082701884Brachybacterium faecium DSM 4810, complete genomehypothetical protein6e-27122
NC_009675:4644173:4662833466283346646261794Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehypothetical protein2e-1584.7
NC_010676:2720068:2744371274437127461761806Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein4e-1273.6
NC_009720:3281000:3304027330402733058351809Xanthobacter autotrophicus Py2, complete genomehypothetical protein8e-1272.8