Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2220890 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2220890, End: 2224132, Length: 3243

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:72952:1153211153211187763456Burkholderia thailandensis E264 chromosome I, complete sequenceDEAD/DEAH box helicase:Helicase, C-terminal0691
NC_015152:2549756:2581409258140925847683360Spirochaeta sp. Buddy chromosome, complete genomehelicase domain-containing protein9e-130465
NC_012108:4971086:5002002500200250052683267Desulfobacterium autotrophicum HRM2, complete genomeDEAD/DEAH box helicase:helicase, C-terminal2e-127457
NC_014973:3452100:3474843347484334780733231Geobacter sp. M18 chromosome, complete genomehelicase domain-containing protein2e-120434
NC_014830:3387479:3417537341753734206773141Intrasporangium calvum DSM 43043 chromosome, complete genomehelicase domain protein2e-116421
NC_013173:1437464:1443050144305014462533204Desulfomicrobium baculatum DSM 4028, complete genomehelicase domain protein7e-114412
NC_015416:161289:1631711631711665063336Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein9e-112405
NC_011071:429204:4531944531944564063213Stenotrophomonas maltophilia R551-3, complete genomehelicase domain protein2e-110401
NC_007925:4355413:4376404437640443796433240Rhodopseudomonas palustris BisB18, complete genomehelicase-like3e-110400
NC_013223:1763631:1778183177818317814463264Desulfohalobium retbaense DSM 5692, complete genomehelicase domain protein3e-108393
NC_014151:3611956:3637529363752936406663138Cellulomonas flavigena DSM 20109 chromosome, complete genomehelicase domain protein4e-107390
NC_013172:606387:6082676082676114823216Brachybacterium faecium DSM 4810, complete genomehelicase family protein2e-102374
NC_016604:917972:9148479148479180263180Mycobacterium rhodesiae NBB3 chromosome, complete genomehelicase family protein2e-96354
NC_017955:4075804:4097512409751241005563045Modestobacter marinus, complete genomehelicase domain-containing protein2e-86321
NC_018581:2768743:2804324280432428075723249Gordonia sp. KTR9 chromosome, complete genomehelicase domain protein8e-84312
NC_009675:4644173:4664619466461946680833465Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehelicase domain-containing protein8e-77289
NC_007517:3430237:3451721345172134547022982Geobacter metallireducens GS-15, complete genomeHelicase-like8e-70266
NC_009720:3281000:3301022330102233040303009Xanthobacter autotrophicus Py2, complete genomehelicase domain-containing protein9e-51202
NC_010676:2720068:2741783274178327443742592Burkholderia phytofirmans PsJN chromosome 2, complete sequenceDEAD-like helicase5e-1997.4
NC_009254:805255:8206008206008240673468Burkholderia vietnamiensis G4 chromosome 3, complete sequencehelicase6e-1067.4
NC_014366:2703226:2725545272554527282832739Gamma proteobacterium HdN1, complete genomehypothetical protein6e-0860.5
NC_013235:508585:5054545054545085883135Nakamurella multipartita DSM 44233, complete genomehelicase domain protein1e-0656.2